Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 16:80226669-81227153

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20 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm41479 16 80294905 to 80300007 5102 + lncRNA gene predicted gene, 41479
D16Mit178 16 80345102 to 80345224 122 DNA segment DNA segment, Chr 16, Massachusetts Institute of Technology 178
Tssr139131 16 80372253 to 80372258 5 + TSS region transcription start site region 139131
Tssr141853 16 80384004 to 80384006 2 - TSS region transcription start site region 141853
D16Mit203 16 80517019 to 80517128 109 DNA segment DNA Segment, Chr 16, Massachusetts Institute of Technology 203
Etia 16 80517019 to 80517128 109 QTL ethanol induced activation
Bpq9 16 80530448 to 80530584 136 QTL blood pressure QTL 9
D16Mit158 16 80530448 to 80530584 136 DNA segment DNA segment, Chr 16, Massachusetts Institute of Technology 158
Gm24773 16 80685225 to 80685323 98 + snRNA gene predicted gene, 24773
Gm49578 16 80710944 to 80711491 547 + pseudogene predicted gene, 49578
Gm19867 16 80726669 to 80727153 484 + pseudogene predicted gene, 19867
Fkbp1a-ps3 16 80949649 to 80949966 317 + pseudogene FK506 binding protein 1a, pseudogene 3
Cpgi8380 16 81200212 to 81201131 919 CpG island CpG island 8380
Tssr139132 16 81200664 to 81200680 16 + TSS region transcription start site region 139132
Ncam2 16 81200697 to 81624290 423593 + protein coding gene neural cell adhesion molecule 2
Tssr139133 16 81200708 to 81200717 9 + TSS region transcription start site region 139133
Tssr139134 16 81200725 to 81200739 14 + TSS region transcription start site region 139134
Tssr139135 16 81200747 to 81200766 19 + TSS region transcription start site region 139135
Tssr139136 16 81201273 to 81201277 4 + TSS region transcription start site region 139136
Tssr139137 16 81203373 to 81203376 3 + TSS region transcription start site region 139137