Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 16:78831072-81051201

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27 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi8379 16 78930929 to 78931491 562 CpG island CpG island 8379
Tssr139130 16 78930940 to 78930958 18 + TSS region transcription start site region 139130
Chodl 16 78930948 to 78951733 20785 + protein coding gene chondrolectin
D16Mit50 16 78952826 to 78952955 129 DNA segment DNA segment, Chr 16, Massachusetts Institute of Technology 50
Tmprss15 16 78953008 to 79091097 138089 - protein coding gene transmembrane protease, serine 15
Gm15692 16 78964096 to 78964441 345 + pseudogene predicted gene 15692
Tssr141851 16 79091065 to 79091074 9 - TSS region transcription start site region 141851
Tssr141852 16 79091078 to 79091107 29 - TSS region transcription start site region 141852
Gm18826 16 79432979 to 79433631 652 + pseudogene predicted gene, 18826
Gm37709 16 79651527 to 79652126 599 + unclassified gene predicted gene, 37709
Rps19-ps12 16 79914460 to 79914871 411 - pseudogene ribosomal protein S19, pseudogene 12
D16Ium62 16 79941072 to 79941201 129 DNA segment DNA segment, Chr 16, Indiana University Medical 62
1700066C05Rik 16 79999382 to 80000544 1162 + lincRNA gene RIKEN cDNA 1700066C05 gene
Gm23083 16 80137352 to 80137467 115 + snoRNA gene predicted gene, 23083
Tgq28 16 80189758 to 80189758 0 QTL triglyceride QTL 28
Gm41479 16 80294905 to 80300007 5102 + lncRNA gene predicted gene, 41479
D16Mit178 16 80345102 to 80345224 122 DNA segment DNA segment, Chr 16, Massachusetts Institute of Technology 178
Tssr139131 16 80372253 to 80372258 5 + TSS region transcription start site region 139131
Tssr141853 16 80384004 to 80384006 2 - TSS region transcription start site region 141853
Etia 16 80517019 to 80517128 109 QTL ethanol induced activation
D16Mit203 16 80517019 to 80517128 109 DNA segment DNA Segment, Chr 16, Massachusetts Institute of Technology 203
D16Mit158 16 80530448 to 80530584 136 DNA segment DNA segment, Chr 16, Massachusetts Institute of Technology 158
Bpq9 16 80530448 to 80530584 136 QTL blood pressure QTL 9
Gm24773 16 80685225 to 80685323 98 + snRNA gene predicted gene, 24773
Gm49578 16 80710944 to 80711491 547 + pseudogene predicted gene, 49578
Gm19867 16 80726669 to 80727153 484 + pseudogene predicted gene, 19867
Fkbp1a-ps3 16 80949649 to 80949966 317 + pseudogene FK506 binding protein 1a, pseudogene 3