Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 16:78459747-78789853

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24 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm49603 16 78477742 to 78480539 2797 - unclassified gene predicted gene, 49603
Gm49604 16 78489680 to 78492955 3275 + unclassified gene predicted gene, 49604
D16Ertd472e 16 78540336 to 78576688 36352 - protein coding gene DNA segment, Chr 16, ERATO Doi 472, expressed
Tssr141840 16 78546642 to 78546667 25 - TSS region transcription start site region 141840
Tssr141841 16 78559549 to 78559552 3 - TSS region transcription start site region 141841
4930478L05Rik 16 78560316 to 78564869 4553 + antisense lncRNA gene RIKEN cDNA 4930478L05 gene
Cpgi8378 16 78575892 to 78577061 1169 CpG island CpG island 8378
Tssr141842 16 78576347 to 78576397 50 - TSS region transcription start site region 141842
Tssr141843 16 78576595 to 78576618 23 - TSS region transcription start site region 141843
Tssr141844 16 78576622 to 78576645 23 - TSS region transcription start site region 141844
Tssr141845 16 78576649 to 78576666 17 - TSS region transcription start site region 141845
Tssr141846 16 78576682 to 78576696 14 - TSS region transcription start site region 141846
Tssr141847 16 78576799 to 78576806 7 - TSS region transcription start site region 141847
Tssr141848 16 78577023 to 78577035 12 - TSS region transcription start site region 141848
Tssr141849 16 78577178 to 78577193 15 - TSS region transcription start site region 141849
Tssr141850 16 78577203 to 78577219 16 - TSS region transcription start site region 141850
Gm24861 16 78624747 to 78624853 106 + snRNA gene predicted gene, 24861
Tssr139126 16 78694985 to 78694991 6 + TSS region transcription start site region 139126
Tssr139127 16 78695006 to 78695017 11 + TSS region transcription start site region 139127
Tssr139128 16 78695022 to 78695036 14 + TSS region transcription start site region 139128
4930570E03Rik 16 78695034 to 78709083 14049 + lincRNA gene RIKEN cDNA 4930570E03 gene
D16Ium49 16 78696272 to 78696518 246 DNA segment DNA segment, Chr 16, Indiana University Medical 49
Tssr139129 16 78707271 to 78707274 3 + TSS region transcription start site region 139129
4930403O18Rik 16 78757733 to 78758984 1251 + unclassified gene RIKEN cDNA 4930403O18 gene