Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 16:78339711-78570329

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20 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cxadr 16 78301489 to 78359774 58285 + protein coding gene coxsackie virus and adenovirus receptor
Gm49590 16 78340756 to 78343468 2712 - unclassified gene predicted gene, 49590
Tssr141836 16 78357307 to 78357325 18 - TSS region transcription start site region 141836
Btg3 16 78359860 to 78377181 17321 - protein coding gene B cell translocation gene 3
Tssr141837 16 78375019 to 78375029 10 - TSS region transcription start site region 141837
Cpgi8377 16 78375866 to 78377389 1523 CpG island CpG island 8377
Tssr139124 16 78376117 to 78376122 5 + TSS region transcription start site region 139124
Tssr141838 16 78376758 to 78376818 60 - TSS region transcription start site region 141838
Tssr141839 16 78410174 to 78410190 16 - TSS region transcription start site region 141839
Gm25038 16 78423730 to 78423859 129 - snoRNA gene predicted gene, 25038
D16Ertd534e 16 78432118 to 78432355 237 DNA segment DNA segment, Chr 16, ERATO Doi 534, expressed
Tssr139125 16 78440169 to 78440177 8 + TSS region transcription start site region 139125
1700015P03Rik 16 78449309 to 78450122 813 unclassified gene RIKEN cDNA 1700015P03 gene
4930572P05Rik 16 78454710 to 78455328 618 unclassified gene RIKEN cDNA 4930572P05 gene
Gm49603 16 78477742 to 78480539 2797 - unclassified gene predicted gene, 49603
Gm49604 16 78489680 to 78492955 3275 + unclassified gene predicted gene, 49604
D16Ertd472e 16 78540336 to 78576688 36352 - protein coding gene DNA segment, Chr 16, ERATO Doi 472, expressed
Tssr141840 16 78546642 to 78546667 25 - TSS region transcription start site region 141840
Tssr141841 16 78559549 to 78559552 3 - TSS region transcription start site region 141841
4930478L05Rik 16 78560316 to 78564869 4553 + antisense lncRNA gene RIKEN cDNA 4930478L05 gene