Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000


Click here to work with the entire chromosomal region 16:78201489-78459774

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32 genes found.
Gene symbol Chromo-
some
Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Eae41 16 40578772 to 78218584 37639812 QTL experimental allergic encephalomyelitis susceptibility 41
Tssr139116 16 78217157 to 78217188 31 + TSS region transcription start site region 139116
D16Mit49 16 78218438 to 78218584 146 DNA segment DNA segment, Chr 16, Massachusetts Institute of Technology 49
Tssr139117 16 78222602 to 78222634 32 + TSS region transcription start site region 139117
Gm31613 16 78222624 to 78238942 16318 + lncRNA gene predicted gene, 31613
Gm41477 16 78229686 to 78236992 7306 - lncRNA gene predicted gene, 41477
Gm25916 16 78240258 to 78240388 130 + snoRNA gene predicted gene, 25916
E330011O21Rik 16 78250861 to 78255454 4593 - lncRNA gene RIKEN cDNA E330011O21 gene
Gm49591 16 78251053 to 78251577 524 + pseudogene predicted gene, 49591
Tssr141834 16 78265949 to 78265980 31 - TSS region transcription start site region 141834
Tssr141835 16 78267831 to 78267838 7 - TSS region transcription start site region 141835
Cpgi8376 16 78301248 to 78302434 1186 CpG island CpG island 8376
Tssr139118 16 78301458 to 78301481 23 + TSS region transcription start site region 139118
Cxadr 16 78301489 to 78359774 58285 + protein coding gene coxsackie virus and adenovirus receptor
Tssr139119 16 78301673 to 78301760 87 + TSS region transcription start site region 139119
Tssr139120 16 78301775 to 78301804 29 + TSS region transcription start site region 139120
Tssr139121 16 78302544 to 78302548 4 + TSS region transcription start site region 139121
Tssr139122 16 78309540 to 78309551 11 + TSS region transcription start site region 139122
Tssr139123 16 78309552 to 78309564 12 + TSS region transcription start site region 139123
Gm49590 16 78340756 to 78343468 2712 - unclassified gene predicted gene, 49590
Tssr141836 16 78357307 to 78357325 18 - TSS region transcription start site region 141836
Btg3 16 78359860 to 78377181 17321 - protein coding gene BTG anti-proliferation factor 3
Tssr141837 16 78375019 to 78375029 10 - TSS region transcription start site region 141837
Cpgi8377 16 78375866 to 78377389 1523 CpG island CpG island 8377
Tssr139124 16 78376117 to 78376122 5 + TSS region transcription start site region 139124
Tssr141838 16 78376758 to 78376818 60 - TSS region transcription start site region 141838
Tssr141839 16 78410174 to 78410190 16 - TSS region transcription start site region 141839
Gm25038 16 78423730 to 78423859 129 - snoRNA gene predicted gene, 25038
D16Ertd534e 16 78432118 to 78432355 237 DNA segment DNA segment, Chr 16, ERATO Doi 534, expressed
Tssr139125 16 78440169 to 78440177 8 + TSS region transcription start site region 139125
1700015P03Rik 16 78449310 to 78450123 813 - lncRNA gene RIKEN cDNA 1700015P03 gene
4930572P05Rik 16 78454711 to 78455329 618 + lncRNA gene RIKEN cDNA 4930572P05 gene