Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 16:78197831-78337838

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20 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Eae41 16 40578772 to 78218584 37639812 QTL experimental allergic encephalomyelitis susceptibility 41
Cpgi8375 16 78198782 to 78199028 246 CpG island CpG island 8375
Tssr139116 16 78217157 to 78217188 31 + TSS region transcription start site region 139116
D16Mit49 16 78218438 to 78218584 146 DNA segment DNA segment, Chr 16, Massachusetts Institute of Technology 49
Tssr139117 16 78222602 to 78222634 32 + TSS region transcription start site region 139117
Gm31613 16 78222624 to 78238942 16318 + lncRNA gene predicted gene, 31613
Gm41477 16 78229686 to 78236481 6795 - lncRNA gene predicted gene, 41477
Gm25916 16 78240258 to 78240388 130 + snoRNA gene predicted gene, 25916
E330011O21Rik 16 78250861 to 78255454 4593 - lncRNA gene RIKEN cDNA E330011O21 gene
Gm49591 16 78251053 to 78251577 524 + pseudogene predicted gene, 49591
Tssr141834 16 78265949 to 78265980 31 - TSS region transcription start site region 141834
Tssr141835 16 78267831 to 78267838 7 - TSS region transcription start site region 141835
Cpgi8376 16 78301248 to 78302434 1186 CpG island CpG island 8376
Tssr139118 16 78301458 to 78301481 23 + TSS region transcription start site region 139118
Cxadr 16 78301489 to 78359774 58285 + protein coding gene coxsackie virus and adenovirus receptor
Tssr139119 16 78301673 to 78301760 87 + TSS region transcription start site region 139119
Tssr139120 16 78301775 to 78301804 29 + TSS region transcription start site region 139120
Tssr139121 16 78302544 to 78302548 4 + TSS region transcription start site region 139121
Tssr139122 16 78309540 to 78309551 11 + TSS region transcription start site region 139122
Tssr139123 16 78309552 to 78309564 12 + TSS region transcription start site region 139123