Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 16:77499602-77849628

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42 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Mir99ahg 16 77329328 to 77558428 229100 + lncRNA gene Mir99a and Mirlet7c-1 host gene (non-protein coding)
Tssr139088 16 77500006 to 77500035 29 + TSS region transcription start site region 139088
Tssr139089 16 77500168 to 77500199 31 + TSS region transcription start site region 139089
Tssr139090 16 77500210 to 77500232 22 + TSS region transcription start site region 139090
Tssr139091 16 77500542 to 77500563 21 + TSS region transcription start site region 139091
Tssr139092 16 77501274 to 77501295 21 + TSS region transcription start site region 139092
Tssr139093 16 77530741 to 77530772 31 + TSS region transcription start site region 139093
Gm36963 16 77539882 to 77542205 2323 + unclassified gene predicted gene, 36963
Tssr139094 16 77545838 to 77545841 3 + TSS region transcription start site region 139094
Gm37606 16 77561650 to 77564765 3115 + unclassified gene predicted gene, 37606
Gm11146 16 77588578 to 77602094 13516 - protein coding gene predicted gene 11146
Tssr139095 16 77594062 to 77594076 14 + TSS region transcription start site region 139095
Tssr139096 16 77594191 to 77594213 22 + TSS region transcription start site region 139096
Tssr139097 16 77594784 to 77594797 13 + TSS region transcription start site region 139097
Tssr139098 16 77598027 to 77598038 11 + TSS region transcription start site region 139098
Tssr139099 16 77598108 to 77598130 22 + TSS region transcription start site region 139099
Tssr139100 16 77598161 to 77598179 18 + TSS region transcription start site region 139100
Tssr139101 16 77598323 to 77598344 21 + TSS region transcription start site region 139101
Mir99a 16 77598936 to 77599000 64 + miRNA gene microRNA 99a
Mirlet7c-1 16 77599657 to 77599750 93 + miRNA gene microRNA let7c-1
Tssr139102 16 77599739 to 77599744 5 + TSS region transcription start site region 139102
Tssr139103 16 77601599 to 77601617 18 + TSS region transcription start site region 139103
Gm37311 16 77616311 to 77618334 2023 + unclassified gene predicted gene, 37311
Tssr139104 16 77625482 to 77625487 5 + TSS region transcription start site region 139104
Tssr139105 16 77626359 to 77626377 18 + TSS region transcription start site region 139105
8030498J20Rik 16 77633875 to 77637848 3973 unclassified gene RIKEN cDNA 8030498J20 gene
Tssr139106 16 77637062 to 77637077 15 + TSS region transcription start site region 139106
Tssr139107 16 77642906 to 77642915 9 + TSS region transcription start site region 139107
Tssr139108 16 77643008 to 77643022 14 + TSS region transcription start site region 139108
Cpgi8374 16 77644383 to 77644752 369 CpG island CpG island 8374
Mir125b-2 16 77646273 to 77646343 70 + miRNA gene microRNA 125b-2
Tssr139109 16 77646338 to 77646342 4 + TSS region transcription start site region 139109
C130023A14Rik 16 77646340 to 77649426 3086 + unclassified gene RIKEN cDNA C130023A14 gene
Tssr139110 16 77651957 to 77651981 24 + TSS region transcription start site region 139110
Tssr139111 16 77653708 to 77653714 6 + TSS region transcription start site region 139111
9530003O04Rik 16 77654531 to 77655438 907 + unclassified gene RIKEN cDNA 9530003O04 gene
Tssr139112 16 77658428 to 77658444 16 + TSS region transcription start site region 139112
Tssr139113 16 77670245 to 77670248 3 + TSS region transcription start site region 139113
Tssr139114 16 77674602 to 77674628 26 + TSS region transcription start site region 139114
Gm37694 16 77685277 to 77687409 2132 + unclassified gene predicted gene, 37694
Tssr139115 16 77838143 to 77838147 4 + TSS region transcription start site region 139115
Gm17333 16 77846604 to 77853084 6480 + lincRNA gene predicted gene, 17333