Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 16:75236758-76296797

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67 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr141788 16 75240161 to 75240170 9 - TSS region transcription start site region 141788
Tssr141789 16 75284838 to 75284845 7 - TSS region transcription start site region 141789
Tssr141790 16 75292346 to 75292359 13 - TSS region transcription start site region 141790
Tssr141791 16 75304388 to 75304391 3 - TSS region transcription start site region 141791
Tssr141792 16 75307975 to 75307979 4 - TSS region transcription start site region 141792
Gm30116 16 75382734 to 75389835 7101 - lncRNA gene predicted gene, 30116
Tssr141793 16 75383701 to 75383705 4 - TSS region transcription start site region 141793
Gm49678 16 75388544 to 75447293 58749 - lincRNA gene predicted gene, 49678
Gm49677 16 75395598 to 75399274 3676 - unclassified gene predicted gene, 49677
Tssr141794 16 75399737 to 75399746 9 - TSS region transcription start site region 141794
n-TIaat1 16 75434179 to 75434252 73 + tRNA gene nuclear encoded tRNA isoleucine 1 (anticodon AAT)
Tssr141795 16 75447107 to 75447116 9 - TSS region transcription start site region 141795
Tssr141796 16 75447186 to 75447214 28 - TSS region transcription start site region 141796
Lipi 16 75540514 to 75586061 45547 - protein coding gene lipase, member I
Del(16Lipi-Usp25)1Dja 16 75540514 to 77116779 1576265 chromosomal deletion deletion, Chr 16, David J Adams 1
Tssr141797 16 75586017 to 75586037 20 - TSS region transcription start site region 141797
Cpgi8369 16 75592692 to 75593333 641 CpG island CpG island 8369
Rbm11 16 75592844 to 75602825 9981 + protein coding gene RNA binding motif protein 11
Tssr139005 16 75592901 to 75592928 27 + TSS region transcription start site region 139005
Tssr139006 16 75592938 to 75592965 27 + TSS region transcription start site region 139006
Gm41474 16 75645638 to 75683274 37636 - lncRNA gene predicted gene, 41474
Gm30162 16 75659356 to 75701091 41735 + lincRNA gene predicted gene, 30162
Tssr139007 16 75659363 to 75659380 17 + TSS region transcription start site region 139007
Tssr141798 16 75683279 to 75683310 31 - TSS region transcription start site region 141798
Gm15553 16 75746207 to 75746468 261 - pseudogene predicted gene 15553
Hspa13 16 75755190 to 75767277 12087 - protein coding gene heat shock protein 70 family, member 13
Dp(16Hspa13-App)2Yah 16 75755190 to 85173952 9418762 chromosomal duplication duplication, Chr 16, Yann Herault 2
Del(16Hspa13-App)3Yah 16 75755190 to 85173952 9418762 cytogenetic marker deletion, Chr 16, Yann Herault 3
Gm22923 16 75764322 to 75764431 109 + miRNA gene predicted gene, 22923
Cpgi8370 16 75766365 to 75767009 644 CpG island CpG island 8370
Tssr141799 16 75766758 to 75766797 39 - TSS region transcription start site region 141799
Tssr141800 16 75767073 to 75767075 2 - TSS region transcription start site region 141800
Gm15554 16 75772163 to 75773057 894 - pseudogene predicted gene 15554
Tssr139008 16 75855712 to 75855729 17 + TSS region transcription start site region 139008
Samsn1 16 75858794 to 75909266 50472 - protein coding gene SAM domain, SH3 domain and nuclear localization signals, 1
Tssr139009 16 75859402 to 75859418 16 + TSS region transcription start site region 139009
Tssr141801 16 75870801 to 75870814 13 - TSS region transcription start site region 141801
Tssr141802 16 75876477 to 75876489 12 - TSS region transcription start site region 141802
Tssr141803 16 75905513 to 75905516 3 - TSS region transcription start site region 141803
Tssr141804 16 75906845 to 75906860 15 - TSS region transcription start site region 141804
Tssr139010 16 75907021 to 75907030 9 + TSS region transcription start site region 139010
Tssr139011 16 75907042 to 75907074 32 + TSS region transcription start site region 139011
Tssr139012 16 75907106 to 75907139 33 + TSS region transcription start site region 139012
Tssr4940 16 75909147 to 75909151 4 - TSS region transcription start site region 4940
Tssr4941 16 75909172 to 75909182 10 - TSS region transcription start site region 4941
Tssr4942 16 75909188 to 75909203 15 - TSS region transcription start site region 4942
Tssr141805 16 75909230 to 75909247 17 - TSS region transcription start site region 141805
Tssr141806 16 75909249 to 75909254 5 - TSS region transcription start site region 141806
Tssr141807 16 75909272 to 75909301 29 - TSS region transcription start site region 141807
Tssr4943 16 75909323 to 75909335 12 - TSS region transcription start site region 4943
Gm15555 16 76000784 to 76034602 33818 + antisense lncRNA gene predicted gene 15555
Tssr141808 16 76022266 to 76022287 21 - TSS region transcription start site region 141808
Tssr141809 16 76022299 to 76022315 16 - TSS region transcription start site region 141809
Tssr141810 16 76093982 to 76093996 14 - TSS region transcription start site region 141810
Tssr139013 16 76122607 to 76122629 22 + TSS region transcription start site region 139013
4930578N18Rik 16 76122613 to 76156086 33473 + lincRNA gene RIKEN cDNA 4930578N18 gene
Tssr4944 16 76132460 to 76132463 3 + TSS region transcription start site region 4944
Gm22268 16 76132541 to 76132671 130 - snoRNA gene predicted gene, 22268
Gm41476 16 76136826 to 76139734 2908 - protein coding gene predicted gene, 41476
Gm26915 16 76144985 to 76145732 747 + pseudogene predicted gene, 26915
Gm30507 16 76186962 to 76249591 62629 - lncRNA gene predicted gene, 30507
Tssr141811 16 76226594 to 76226607 13 - TSS region transcription start site region 141811
Tssr141812 16 76249458 to 76249467 9 - TSS region transcription start site region 141812
Nrip1 16 76287400 to 76373827 86427 - protein coding gene nuclear receptor interacting protein 1
Cpgi8371 16 76292860 to 76293740 880 CpG island CpG island 8371
Tssr139014 16 76294100 to 76294108 8 + TSS region transcription start site region 139014
Gm30569 16 76295151 to 76312385 17234 + lncRNA gene predicted gene, 30569