Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

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Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 16:73628982-78558996

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369 genes found. Result truncated to 200 rows.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Eae41 16 40578772 to 78218584 37639812 QTL experimental allergic encephalomyelitis susceptibility 41
Tssr4937 16 73678900 to 73678902 2 + TSS region transcription start site region 4937
Pod 16 73747957 to 84553438 10805481 QTL plasticity of ocular dominance
Tssr4938 16 73794140 to 73794141 1 - TSS region transcription start site region 4938
D16Mit175 16 73881878 to 73881980 102 DNA segment DNA segment, Chr 16, Massachusetts Institute of Technology 175
Robo2 16 73891839 to 74411825 519986 - protein coding gene roundabout guidance receptor 2
Tssr141724 16 73913096 to 73913098 2 - TSS region transcription start site region 141724
Tssr141725 16 73958357 to 73958368 11 - TSS region transcription start site region 141725
Tssr141726 16 73958385 to 73958406 21 - TSS region transcription start site region 141726
Tssr141727 16 73958408 to 73958411 3 - TSS region transcription start site region 141727
Gm24272 16 73974441 to 73974538 97 + miRNA gene predicted gene, 24272
Tssr141728 16 74053003 to 74053007 4 - TSS region transcription start site region 141728
Gm22163 16 74058899 to 74059033 134 - snoRNA gene predicted gene, 22163
Gm49660 16 74062050 to 74065853 3803 - unclassified gene predicted gene, 49660
2510042H03Rik 16 74167221 to 74167988 767 unclassified gene RIKEN cDNA 2510042H03 gene
Gm49659 16 74176793 to 74178834 2041 - unclassified gene predicted gene, 49659
Gm49658 16 74188831 to 74192499 3668 - unclassified gene predicted gene, 49658
D16Ium57 16 74242148 to 74242380 232 DNA segment DNA segment, Chr 16, Indiana University Medical 57
Gm18021 16 74248927 to 74249731 804 + pseudogene predicted gene, 18021
Tssr141729 16 74279195 to 74279206 11 - TSS region transcription start site region 141729
Tssr141730 16 74279314 to 74279353 39 - TSS region transcription start site region 141730
Tssr141731 16 74279415 to 74279454 39 - TSS region transcription start site region 141731
Tssr141732 16 74279456 to 74279470 14 - TSS region transcription start site region 141732
Tssr141733 16 74279637 to 74279643 6 - TSS region transcription start site region 141733
Tssr141734 16 74279737 to 74279741 4 - TSS region transcription start site region 141734
Tssr141735 16 74301391 to 74301396 5 - TSS region transcription start site region 141735
Tssr141736 16 74303685 to 74303688 3 - TSS region transcription start site region 141736
Tssr4939 16 74306528 to 74306537 9 - TSS region transcription start site region 4939
Mir691 16 74341990 to 74342067 77 - miRNA gene microRNA 691
Cpgi8368 16 74411344 to 74412225 881 CpG island CpG island 8368
Tssr141737 16 74411415 to 74411430 15 - TSS region transcription start site region 141737
Tssr141738 16 74411444 to 74411451 7 - TSS region transcription start site region 141738
Tssr141739 16 74411507 to 74411543 36 - TSS region transcription start site region 141739
Tssr141740 16 74411567 to 74411628 61 - TSS region transcription start site region 141740
Tssr141741 16 74411718 to 74411731 13 - TSS region transcription start site region 141741
Tssr141742 16 74411776 to 74411792 16 - TSS region transcription start site region 141742
Tssr141743 16 74411801 to 74411806 5 - TSS region transcription start site region 141743
Tssr141744 16 74411807 to 74411832 25 - TSS region transcription start site region 141744
Tssr141745 16 74411866 to 74411880 14 - TSS region transcription start site region 141745
Tssr141746 16 74412116 to 74412131 15 - TSS region transcription start site region 141746
Tssr141747 16 74502586 to 74502588 2 - TSS region transcription start site region 141747
Gm49671 16 74606262 to 74606561 299 + pseudogene predicted gene, 49671
Gm26307 16 74607757 to 74607882 125 + snoRNA gene predicted gene, 26307
Tssr139000 16 74620031 to 74620039 8 + TSS region transcription start site region 139000
Tssr139001 16 74620040 to 74620050 10 + TSS region transcription start site region 139001
Tssr139002 16 74620059 to 74620069 10 + TSS region transcription start site region 139002
Tssr141748 16 74621230 to 74621236 6 - TSS region transcription start site region 141748
Tssr141749 16 74644231 to 74644237 6 - TSS region transcription start site region 141749
Tssr141750 16 74672469 to 74672480 11 - TSS region transcription start site region 141750
Tssr141751 16 74730959 to 74730963 4 - TSS region transcription start site region 141751
Tssr141752 16 74731379 to 74731381 2 - TSS region transcription start site region 141752
Tssr141753 16 74736248 to 74736253 5 - TSS region transcription start site region 141753
Tssr141754 16 74754645 to 74754649 4 - TSS region transcription start site region 141754
Tssr141755 16 74760649 to 74760660 11 - TSS region transcription start site region 141755
Tssr141756 16 74760711 to 74760725 14 - TSS region transcription start site region 141756
Tssr139003 16 74804961 to 74804965 4 + TSS region transcription start site region 139003
Tssr141757 16 74815197 to 74815206 9 - TSS region transcription start site region 141757
Tssr141758 16 74826734 to 74826750 16 - TSS region transcription start site region 141758
Tssr141759 16 74826801 to 74826813 12 - TSS region transcription start site region 141759
Tssr139004 16 74828357 to 74828359 2 + TSS region transcription start site region 139004
Tssr141760 16 74828845 to 74828850 5 - TSS region transcription start site region 141760
Tssr141761 16 74867090 to 74867099 9 - TSS region transcription start site region 141761
Gm49674 16 74873039 to 74875938 2899 - unclassified gene predicted gene, 49674
Tssr141762 16 74879449 to 74879452 3 - TSS region transcription start site region 141762
Tssr141763 16 74925850 to 74925857 7 - TSS region transcription start site region 141763
Tssr141764 16 74961139 to 74961143 4 - TSS region transcription start site region 141764
Gm26937 16 74961240 to 74962247 1007 + pseudogene predicted gene, 26937
E130102B10Rik 16 75010698 to 75011089 391 unclassified gene RIKEN cDNA E130102B10 gene
Tssr141765 16 75016103 to 75016116 13 - TSS region transcription start site region 141765
Tssr141766 16 75016141 to 75016161 20 - TSS region transcription start site region 141766
Tssr141767 16 75016165 to 75016186 21 - TSS region transcription start site region 141767
Tssr141768 16 75016425 to 75016434 9 - TSS region transcription start site region 141768
A630036G19Rik 16 75030852 to 75034931 4079 - unclassified gene RIKEN cDNA A630036G19 gene
Tssr141769 16 75047400 to 75047437 37 - TSS region transcription start site region 141769
Tssr141770 16 75047767 to 75047781 14 - TSS region transcription start site region 141770
Tssr141771 16 75047791 to 75047802 11 - TSS region transcription start site region 141771
Tssr141772 16 75047828 to 75047834 6 - TSS region transcription start site region 141772
Tssr141773 16 75052190 to 75052196 6 - TSS region transcription start site region 141773
Tssr141774 16 75053723 to 75053727 4 - TSS region transcription start site region 141774
D16Mit93 16 75066542 to 75066649 107 DNA segment DNA segment, Chr 16, Massachusetts Institute of Technology 93
Tssr141775 16 75092427 to 75092430 3 - TSS region transcription start site region 141775
Tssr141776 16 75092533 to 75092552 19 - TSS region transcription start site region 141776
Tssr141777 16 75092563 to 75092604 41 - TSS region transcription start site region 141777
Tssr141778 16 75092696 to 75092706 10 - TSS region transcription start site region 141778
Tssr141779 16 75092708 to 75092734 26 - TSS region transcription start site region 141779
Tssr141780 16 75092754 to 75092773 19 - TSS region transcription start site region 141780
Tssr141781 16 75092817 to 75092843 26 - TSS region transcription start site region 141781
Tssr141782 16 75092920 to 75092931 11 - TSS region transcription start site region 141782
Tssr141783 16 75092974 to 75092997 23 - TSS region transcription start site region 141783
Tssr141784 16 75093082 to 75093096 14 - TSS region transcription start site region 141784
Tssr141785 16 75130116 to 75130119 3 - TSS region transcription start site region 141785
Tssr141786 16 75141901 to 75141904 3 - TSS region transcription start site region 141786
Gm49676 16 75147233 to 75147829 596 + pseudogene predicted gene, 49676
Tssr141787 16 75187183 to 75187187 4 - TSS region transcription start site region 141787
Tssr141788 16 75240161 to 75240170 9 - TSS region transcription start site region 141788
Tssr141789 16 75284838 to 75284845 7 - TSS region transcription start site region 141789
Tssr141790 16 75292346 to 75292359 13 - TSS region transcription start site region 141790
Tssr141791 16 75304388 to 75304391 3 - TSS region transcription start site region 141791
Tssr141792 16 75307975 to 75307979 4 - TSS region transcription start site region 141792
Gm30116 16 75382734 to 75389835 7101 - lncRNA gene predicted gene, 30116
Tssr141793 16 75383701 to 75383705 4 - TSS region transcription start site region 141793
Gm49678 16 75388544 to 75447293 58749 - lincRNA gene predicted gene, 49678
Gm49677 16 75395598 to 75399274 3676 - unclassified gene predicted gene, 49677
Tssr141794 16 75399737 to 75399746 9 - TSS region transcription start site region 141794
n-TIaat1 16 75434179 to 75434252 73 + tRNA gene nuclear encoded tRNA isoleucine 1 (anticodon AAT)
Tssr141795 16 75447107 to 75447116 9 - TSS region transcription start site region 141795
Tssr141796 16 75447186 to 75447214 28 - TSS region transcription start site region 141796
Del(16Lipi-Usp25)1Dja 16 75540514 to 77116779 1576265 chromosomal deletion deletion, Chr 16, David J Adams 1
Lipi 16 75540514 to 75586061 45547 - protein coding gene lipase, member I
Tssr141797 16 75586017 to 75586037 20 - TSS region transcription start site region 141797
Cpgi8369 16 75592692 to 75593333 641 CpG island CpG island 8369
Rbm11 16 75592844 to 75602825 9981 + protein coding gene RNA binding motif protein 11
Tssr139005 16 75592901 to 75592928 27 + TSS region transcription start site region 139005
Tssr139006 16 75592938 to 75592965 27 + TSS region transcription start site region 139006
Gm41474 16 75645638 to 75683274 37636 - lncRNA gene predicted gene, 41474
Gm30162 16 75659356 to 75701091 41735 + lincRNA gene predicted gene, 30162
Tssr139007 16 75659363 to 75659380 17 + TSS region transcription start site region 139007
Tssr141798 16 75683279 to 75683310 31 - TSS region transcription start site region 141798
Gm15553 16 75746207 to 75746468 261 - pseudogene predicted gene 15553
Del(16Hspa13-App)3Yah 16 75755190 to 85173952 9418762 cytogenetic marker deletion, Chr 16, Yann Herault 3
Dp(16Hspa13-App)2Yah 16 75755190 to 85173952 9418762 chromosomal duplication duplication, Chr 16, Yann Herault 2
Hspa13 16 75755190 to 75767277 12087 - protein coding gene heat shock protein 70 family, member 13
Gm22923 16 75764322 to 75764431 109 + miRNA gene predicted gene, 22923
Cpgi8370 16 75766365 to 75767009 644 CpG island CpG island 8370
Tssr141799 16 75766758 to 75766797 39 - TSS region transcription start site region 141799
Tssr141800 16 75767073 to 75767075 2 - TSS region transcription start site region 141800
Gm15554 16 75772163 to 75773057 894 - pseudogene predicted gene 15554
Tssr139008 16 75855712 to 75855729 17 + TSS region transcription start site region 139008
Samsn1 16 75858794 to 75909266 50472 - protein coding gene SAM domain, SH3 domain and nuclear localization signals, 1
Tssr139009 16 75859402 to 75859418 16 + TSS region transcription start site region 139009
Tssr141801 16 75870801 to 75870814 13 - TSS region transcription start site region 141801
Tssr141802 16 75876477 to 75876489 12 - TSS region transcription start site region 141802
Tssr141803 16 75905513 to 75905516 3 - TSS region transcription start site region 141803
Tssr141804 16 75906845 to 75906860 15 - TSS region transcription start site region 141804
Tssr139010 16 75907021 to 75907030 9 + TSS region transcription start site region 139010
Tssr139011 16 75907042 to 75907074 32 + TSS region transcription start site region 139011
Tssr139012 16 75907106 to 75907139 33 + TSS region transcription start site region 139012
Tssr4940 16 75909147 to 75909151 4 - TSS region transcription start site region 4940
Tssr4941 16 75909172 to 75909182 10 - TSS region transcription start site region 4941
Tssr4942 16 75909188 to 75909203 15 - TSS region transcription start site region 4942
Tssr141805 16 75909230 to 75909247 17 - TSS region transcription start site region 141805
Tssr141806 16 75909249 to 75909254 5 - TSS region transcription start site region 141806
Tssr141807 16 75909272 to 75909301 29 - TSS region transcription start site region 141807
Tssr4943 16 75909323 to 75909335 12 - TSS region transcription start site region 4943
Gm15555 16 76000784 to 76034602 33818 + antisense lncRNA gene predicted gene 15555
Tssr141808 16 76022266 to 76022287 21 - TSS region transcription start site region 141808
Tssr141809 16 76022299 to 76022315 16 - TSS region transcription start site region 141809
Tssr141810 16 76093982 to 76093996 14 - TSS region transcription start site region 141810
Tssr139013 16 76122607 to 76122629 22 + TSS region transcription start site region 139013
4930578N18Rik 16 76122613 to 76156086 33473 + lincRNA gene RIKEN cDNA 4930578N18 gene
Tssr4944 16 76132460 to 76132463 3 + TSS region transcription start site region 4944
Gm22268 16 76132541 to 76132671 130 - snoRNA gene predicted gene, 22268
Gm41476 16 76136826 to 76139734 2908 - protein coding gene predicted gene, 41476
Gm26915 16 76144985 to 76145732 747 + pseudogene predicted gene, 26915
Gm30507 16 76186962 to 76249591 62629 - lncRNA gene predicted gene, 30507
Tssr141811 16 76226594 to 76226607 13 - TSS region transcription start site region 141811
Tssr141812 16 76249458 to 76249467 9 - TSS region transcription start site region 141812
Nrip1 16 76287400 to 76373827 86427 - protein coding gene nuclear receptor interacting protein 1
Cpgi8371 16 76292860 to 76293740 880 CpG island CpG island 8371
Tssr139014 16 76294100 to 76294108 8 + TSS region transcription start site region 139014
Gm30569 16 76295151 to 76312385 17234 + lncRNA gene predicted gene, 30569
Tssr141813 16 76318609 to 76318618 9 - TSS region transcription start site region 141813
Tssr141814 16 76324786 to 76324792 6 - TSS region transcription start site region 141814
Tssr141815 16 76337040 to 76337077 37 - TSS region transcription start site region 141815
Tssr139015 16 76337248 to 76337259 11 + TSS region transcription start site region 139015
Tssr141816 16 76339285 to 76339312 27 - TSS region transcription start site region 141816
Tssr139016 16 76342011 to 76342015 4 + TSS region transcription start site region 139016
Tssr141817 16 76347950 to 76347954 4 - TSS region transcription start site region 141817
Tssr141818 16 76359720 to 76359723 3 - TSS region transcription start site region 141818
Tssr141819 16 76365118 to 76365122 4 - TSS region transcription start site region 141819
Cpgi8372 16 76372005 to 76373814 1809 CpG island CpG island 8372
Tssr141820 16 76373014 to 76373103 89 - TSS region transcription start site region 141820
Tssr139017 16 76373097 to 76373107 10 + TSS region transcription start site region 139017
Tssr139018 16 76373193 to 76373213 20 + TSS region transcription start site region 139018
Tssr141821 16 76373839 to 76373852 13 - TSS region transcription start site region 141821
Tssr141822 16 76373854 to 76373871 17 - TSS region transcription start site region 141822
Tssr141823 16 76373872 to 76373886 14 - TSS region transcription start site region 141823
Gm49587 16 76383107 to 76398126 15019 + lincRNA gene predicted gene, 49587
Gm9843 16 76403251 to 76403652 401 - pseudogene predicted gene 9843
Tssr139019 16 76403325 to 76403378 53 + TSS region transcription start site region 139019
Tssr139020 16 76403415 to 76403431 16 + TSS region transcription start site region 139020
Tssr141824 16 76403673 to 76403717 44 - TSS region transcription start site region 141824
Gm45030 16 76427743 to 76502909 75166 - lincRNA gene predicted gene 45030
Gm30615 16 76454625 to 76471287 16662 - lncRNA gene predicted gene, 30615
Tssr139021 16 76500250 to 76500263 13 + TSS region transcription start site region 139021
Tssr139022 16 76548743 to 76548785 42 + TSS region transcription start site region 139022
Gm30726 16 76548798 to 76550857 2059 + lincRNA gene predicted gene, 30726
D16Mit176 16 76576433 to 76576550 117 DNA segment DNA segment, Chr 16, Massachusetts Institute of Technology 176
Gm45029 16 76680513 to 76741443 60930 + lincRNA gene predicted gene 45029
Gm30790 16 76751793 to 76779092 27299 - lincRNA gene predicted gene, 30790
Tssr139023 16 76814520 to 76814524 4 + TSS region transcription start site region 139023
D16Mit188 16 76817593 to 76817716 123 DNA segment DNA segment, Chr 16, Massachusetts Institute of Technology 188
1700063K16Rik 16 76821293 to 76821741 448 - pseudogene RIKEN cDNA 1700063K16 gene
Tssr139024 16 76824770 to 76824772 2 + TSS region transcription start site region 139024
Tssr139025 16 76926207 to 76926216 9 + TSS region transcription start site region 139025
Gm7501 16 76941616 to 76942183 567 + pseudogene predicted gene 7501
1700041M19Rik 16 77004228 to 77010881 6653 - lincRNA gene RIKEN cDNA 1700041M19 gene
Tssr141825 16 77010869 to 77010888 19 - TSS region transcription start site region 141825
Cpgi8373 16 77013310 to 77014442 1132 CpG island CpG island 8373
Tssr139026 16 77013700 to 77013775 75 + TSS region transcription start site region 139026