Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 16:7330102-8419859

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21 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Rbfox1 16 5885355 to 7411526 1526171 + protein coding gene RNA binding protein, fox-1 homolog (C. elegans) 1
Tssr136987 16 7341519 to 7341524 5 + TSS region transcription start site region 136987
Tssr136988 16 7409781 to 7409794 13 + TSS region transcription start site region 136988
Heal11 16 7445880 to 7445989 109 QTL wound healing/regeneration 11
D16Mit122 16 7445880 to 7445989 109 DNA segment DNA segment, Chr 16, Massachusetts Institute of Technology 122
Nhdlq10 16 7445880 to 7445989 109 QTL non-HDL QTL 10
Gm49533 16 7708736 to 7709066 330 - pseudogene predicted gene, 49533
Tssr4787 16 7767870 to 7767879 9 + TSS region transcription start site region 4787
Gm29854 16 7767891 to 7771595 3704 + lncRNA gene predicted gene, 29854
Tssr136989 16 7828205 to 7828208 3 + TSS region transcription start site region 136989
Gm49534 16 7870102 to 7879859 9757 + lincRNA gene predicted gene, 49534
Tssr139854 16 7951666 to 7951676 10 - TSS region transcription start site region 139854
D16Mit142 16 7983236 to 7983378 142 DNA segment DNA segment, Chr 16, Massachusetts Institute of Technology 142
Gm49535 16 8103374 to 8103788 414 - pseudogene predicted gene, 49535
Gm23476 16 8203975 to 8204248 273 + unclassified non-coding RNA gene predicted gene, 23476
Gm26159 16 8336993 to 8337096 103 + snRNA gene predicted gene, 26159
Gm29936 16 8338906 to 8365012 26106 - lncRNA gene predicted gene, 29936
Tssr139855 16 8362727 to 8362737 10 - TSS region transcription start site region 139855
Gm24579 16 8402814 to 8402957 143 + snoRNA gene predicted gene, 24579
Tmem114 16 8409276 to 8425136 15860 - protein coding gene transmembrane protein 114
Dice1a 16 11139842 to 7983236 -3156606 QTL determination of interleukin 4 commitment 1a