Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 16:72822516-74202634

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50 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Skts-fp3 16 40233519 to 73127497 32893978 QTL skin tumor susceptibility in FVB and PWK 3
Robo1 16 72308306 to 73046095 737789 + protein coding gene roundabout guidance receptor 1
Tssr141723 16 72823665 to 72823666 1 - TSS region transcription start site region 141723
D16Mit65 16 72864958 to 72865073 115 DNA segment DNA segment, Chr 16, Massachusetts Institute of Technology 65
Lith14 16 72864958 to 72865073 115 QTL lithogenic gene 14
Cpgi8367 16 72894502 to 72894767 265 CpG island CpG island 8367
D16Mit151 16 72922765 to 72922896 131 DNA segment DNA segment, Chr 16, Massachusetts Institute of Technology 151
Tssr138989 16 72930933 to 72930937 4 + TSS region transcription start site region 138989
Tssr4935 16 72957461 to 72957466 5 + TSS region transcription start site region 4935
Tssr138990 16 72982944 to 72982945 1 + TSS region transcription start site region 138990
D16Mit187 16 73000593 to 73000702 109 DNA segment DNA segment, Chr 16, Massachusetts Institute of Technology 187
Tssr138991 16 73011592 to 73011605 13 + TSS region transcription start site region 138991
Tssr138992 16 73011607 to 73011621 14 + TSS region transcription start site region 138992
Tssr138993 16 73045333 to 73045349 16 + TSS region transcription start site region 138993
Tssr138994 16 73045776 to 73045788 12 + TSS region transcription start site region 138994
4930500H12Rik 16 73072346 to 73410430 338084 + lncRNA gene RIKEN cDNA 4930500H12 gene
Tssr138995 16 73072363 to 73072366 3 + TSS region transcription start site region 138995
Tssr138996 16 73072369 to 73072382 13 + TSS region transcription start site region 138996
Tssr138997 16 73072389 to 73072400 11 + TSS region transcription start site region 138997
Tssr4936 16 73086444 to 73086445 1 + TSS region transcription start site region 4936
D16Mit202 16 73127308 to 73127497 189 DNA segment DNA Segment, Chr 16, Massachusetts Institute of Technology 202
Tssr138998 16 73202097 to 73202098 1 + TSS region transcription start site region 138998
D16Mit141.2 16 73228347 to 73228461 114 DNA segment DNA segment, Chr 16, Massachusetts Institute of Technology 141.2
D16Mit141 16 73228503 to 73228579 76 DNA segment DNA segment, Chr 16, Massachusetts Institute of Technology 141
D16Mit116 16 73332909 to 73333034 125 DNA segment DNA segment, Chr 16, Massachusetts Institute of Technology 116
Gm25699 16 73422793 to 73422959 166 - snRNA gene predicted gene, 25699
Gm18825 16 73463807 to 73464823 1016 - pseudogene predicted gene, 18825
2310066N15Rik 16 73471718 to 73472462 744 unclassified gene RIKEN cDNA 2310066N15 gene
Gm41472 16 73481105 to 73508146 27041 + lncRNA gene predicted gene, 41472
Gm49680 16 73484857 to 73485315 458 + pseudogene predicted gene, 49680
Tssr138999 16 73497317 to 73497328 11 + TSS region transcription start site region 138999
D16Mit117 16 73512390 to 73512527 137 DNA segment DNA segment, Chr 16, Massachusetts Institute of Technology 117
D16Mit117.1 16 73512516 to 73512634 118 DNA segment DNA segment, Chr 16, Massachusetts Institute of Technology 117.1
Gm18168 16 73603534 to 73604054 520 - pseudogene predicted gene, 18168
Tssr4937 16 73678900 to 73678902 2 + TSS region transcription start site region 4937
Pod 16 73747957 to 84553438 10805481 QTL plasticity of ocular dominance
Tssr4938 16 73794140 to 73794141 1 - TSS region transcription start site region 4938
D16Mit175 16 73881878 to 73881980 102 DNA segment DNA segment, Chr 16, Massachusetts Institute of Technology 175
Robo2 16 73891839 to 74411825 519986 - protein coding gene roundabout guidance receptor 2
Tssr141724 16 73913096 to 73913098 2 - TSS region transcription start site region 141724
Tssr141725 16 73958357 to 73958368 11 - TSS region transcription start site region 141725
Tssr141726 16 73958385 to 73958406 21 - TSS region transcription start site region 141726
Tssr141727 16 73958408 to 73958411 3 - TSS region transcription start site region 141727
Gm24272 16 73974441 to 73974538 97 + miRNA gene predicted gene, 24272
Tssr141728 16 74053003 to 74053007 4 - TSS region transcription start site region 141728
Gm22163 16 74058899 to 74059033 134 - snoRNA gene predicted gene, 22163
Gm49660 16 74062050 to 74065853 3803 - unclassified gene predicted gene, 49660
2510042H03Rik 16 74167221 to 74167988 767 unclassified gene RIKEN cDNA 2510042H03 gene
Gm49659 16 74176793 to 74178834 2041 - unclassified gene predicted gene, 49659
Gm49658 16 74188831 to 74192499 3668 - unclassified gene predicted gene, 49658