Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 16:72576105-74413146

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91 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Skts-fp3 16 40233519 to 73127497 32893978 QTL skin tumor susceptibility in FVB and PWK 3
Robo1 16 72308306 to 73046095 737789 + protein coding gene roundabout guidance receptor 1
Tssr138975 16 72636899 to 72636900 1 + TSS region transcription start site region 138975
Tssr138976 16 72639607 to 72639611 4 + TSS region transcription start site region 138976
Gm29908 16 72654929 to 72663066 8137 - lncRNA gene predicted gene, 29908
Cpgi8366 16 72662974 to 72664294 1320 CpG island CpG island 8366
Tssr138977 16 72663031 to 72663044 13 + TSS region transcription start site region 138977
Tssr138978 16 72663048 to 72663065 17 + TSS region transcription start site region 138978
Tssr138979 16 72663116 to 72663127 11 + TSS region transcription start site region 138979
Tssr138980 16 72663143 to 72663189 46 + TSS region transcription start site region 138980
Tssr138981 16 72663197 to 72663210 13 + TSS region transcription start site region 138981
Tssr138982 16 72663544 to 72663622 78 + TSS region transcription start site region 138982
Tssr138983 16 72663743 to 72663754 11 + TSS region transcription start site region 138983
Tssr138984 16 72663787 to 72663815 28 + TSS region transcription start site region 138984
Tssr138985 16 72669508 to 72669512 4 + TSS region transcription start site region 138985
C030046M01Rik 16 72731487 to 72732553 1066 unclassified gene RIKEN cDNA C030046M01 gene
Tssr138986 16 72765070 to 72765076 6 + TSS region transcription start site region 138986
Tssr138987 16 72777047 to 72777052 5 + TSS region transcription start site region 138987
Tssr138988 16 72788400 to 72788401 1 + TSS region transcription start site region 138988
D230034L24Rik 16 72797806 to 72802004 4198 unclassified gene RIKEN cDNA D230034L24 gene
Tssr141723 16 72823665 to 72823666 1 - TSS region transcription start site region 141723
D16Mit65 16 72864958 to 72865073 115 DNA segment DNA segment, Chr 16, Massachusetts Institute of Technology 65
Lith14 16 72864958 to 72865073 115 QTL lithogenic gene 14
Cpgi8367 16 72894502 to 72894767 265 CpG island CpG island 8367
D16Mit151 16 72922765 to 72922896 131 DNA segment DNA segment, Chr 16, Massachusetts Institute of Technology 151
Tssr138989 16 72930933 to 72930937 4 + TSS region transcription start site region 138989
Tssr4935 16 72957461 to 72957466 5 + TSS region transcription start site region 4935
Tssr138990 16 72982944 to 72982945 1 + TSS region transcription start site region 138990
D16Mit187 16 73000593 to 73000702 109 DNA segment DNA segment, Chr 16, Massachusetts Institute of Technology 187
Tssr138991 16 73011592 to 73011605 13 + TSS region transcription start site region 138991
Tssr138992 16 73011607 to 73011621 14 + TSS region transcription start site region 138992
Tssr138993 16 73045333 to 73045349 16 + TSS region transcription start site region 138993
Tssr138994 16 73045776 to 73045788 12 + TSS region transcription start site region 138994
4930500H12Rik 16 73072346 to 73410430 338084 + lncRNA gene RIKEN cDNA 4930500H12 gene
Tssr138995 16 73072363 to 73072366 3 + TSS region transcription start site region 138995
Tssr138996 16 73072369 to 73072382 13 + TSS region transcription start site region 138996
Tssr138997 16 73072389 to 73072400 11 + TSS region transcription start site region 138997
Tssr4936 16 73086444 to 73086445 1 + TSS region transcription start site region 4936
D16Mit202 16 73127308 to 73127497 189 DNA segment DNA Segment, Chr 16, Massachusetts Institute of Technology 202
Tssr138998 16 73202097 to 73202098 1 + TSS region transcription start site region 138998
D16Mit141.2 16 73228347 to 73228461 114 DNA segment DNA segment, Chr 16, Massachusetts Institute of Technology 141.2
D16Mit141 16 73228503 to 73228579 76 DNA segment DNA segment, Chr 16, Massachusetts Institute of Technology 141
D16Mit116 16 73332909 to 73333034 125 DNA segment DNA segment, Chr 16, Massachusetts Institute of Technology 116
Gm25699 16 73422793 to 73422959 166 - snRNA gene predicted gene, 25699
Gm18825 16 73463807 to 73464823 1016 - pseudogene predicted gene, 18825
2310066N15Rik 16 73471718 to 73472462 744 unclassified gene RIKEN cDNA 2310066N15 gene
Gm41472 16 73481105 to 73508146 27041 + lncRNA gene predicted gene, 41472
Gm49680 16 73484857 to 73485315 458 + pseudogene predicted gene, 49680
Tssr138999 16 73497317 to 73497328 11 + TSS region transcription start site region 138999
D16Mit117 16 73512390 to 73512527 137 DNA segment DNA segment, Chr 16, Massachusetts Institute of Technology 117
D16Mit117.1 16 73512516 to 73512634 118 DNA segment DNA segment, Chr 16, Massachusetts Institute of Technology 117.1
Gm18168 16 73603534 to 73604054 520 - pseudogene predicted gene, 18168
Tssr4937 16 73678900 to 73678902 2 + TSS region transcription start site region 4937
Pod 16 73747957 to 84553438 10805481 QTL plasticity of ocular dominance
Tssr4938 16 73794140 to 73794141 1 - TSS region transcription start site region 4938
D16Mit175 16 73881878 to 73881980 102 DNA segment DNA segment, Chr 16, Massachusetts Institute of Technology 175
Robo2 16 73891839 to 74411825 519986 - protein coding gene roundabout guidance receptor 2
Tssr141724 16 73913096 to 73913098 2 - TSS region transcription start site region 141724
Tssr141725 16 73958357 to 73958368 11 - TSS region transcription start site region 141725
Tssr141726 16 73958385 to 73958406 21 - TSS region transcription start site region 141726
Tssr141727 16 73958408 to 73958411 3 - TSS region transcription start site region 141727
Gm24272 16 73974441 to 73974538 97 + miRNA gene predicted gene, 24272
Tssr141728 16 74053003 to 74053007 4 - TSS region transcription start site region 141728
Gm22163 16 74058899 to 74059033 134 - snoRNA gene predicted gene, 22163
Gm49660 16 74062050 to 74065853 3803 - unclassified gene predicted gene, 49660
2510042H03Rik 16 74167221 to 74167988 767 unclassified gene RIKEN cDNA 2510042H03 gene
Gm49659 16 74176793 to 74178834 2041 - unclassified gene predicted gene, 49659
Gm49658 16 74188831 to 74192499 3668 - unclassified gene predicted gene, 49658
D16Ium57 16 74242148 to 74242380 232 DNA segment DNA segment, Chr 16, Indiana University Medical 57
Gm18021 16 74248927 to 74249731 804 + pseudogene predicted gene, 18021
Tssr141729 16 74279195 to 74279206 11 - TSS region transcription start site region 141729
Tssr141730 16 74279314 to 74279353 39 - TSS region transcription start site region 141730
Tssr141731 16 74279415 to 74279454 39 - TSS region transcription start site region 141731
Tssr141732 16 74279456 to 74279470 14 - TSS region transcription start site region 141732
Tssr141733 16 74279637 to 74279643 6 - TSS region transcription start site region 141733
Tssr141734 16 74279737 to 74279741 4 - TSS region transcription start site region 141734
Tssr141735 16 74301391 to 74301396 5 - TSS region transcription start site region 141735
Tssr141736 16 74303685 to 74303688 3 - TSS region transcription start site region 141736
Tssr4939 16 74306528 to 74306537 9 - TSS region transcription start site region 4939
Mir691 16 74341990 to 74342067 77 - miRNA gene microRNA 691
Cpgi8368 16 74411344 to 74412225 881 CpG island CpG island 8368
Tssr141737 16 74411415 to 74411430 15 - TSS region transcription start site region 141737
Tssr141738 16 74411444 to 74411451 7 - TSS region transcription start site region 141738
Tssr141739 16 74411507 to 74411543 36 - TSS region transcription start site region 141739
Tssr141740 16 74411567 to 74411628 61 - TSS region transcription start site region 141740
Tssr141741 16 74411718 to 74411731 13 - TSS region transcription start site region 141741
Tssr141742 16 74411776 to 74411792 16 - TSS region transcription start site region 141742
Tssr141743 16 74411801 to 74411806 5 - TSS region transcription start site region 141743
Tssr141744 16 74411807 to 74411832 25 - TSS region transcription start site region 141744
Tssr141745 16 74411866 to 74411880 14 - TSS region transcription start site region 141745
Tssr141746 16 74412116 to 74412131 15 - TSS region transcription start site region 141746