Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 16:72189958-73540073

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62 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Skts-fp3 16 40233519 to 73127497 32893978 QTL skin tumor susceptibility in FVB and PWK 3
Dice1b 16 45690637 to 72477597 26786960 QTL determination of interleukin 4 commitment 1b
8030451O07Rik 16 72226383 to 72234327 7944 - lincRNA gene RIKEN cDNA 8030451O07 gene
Tssr141722 16 72264401 to 72264405 4 - TSS region transcription start site region 141722
Robo1 16 72308306 to 73046095 737789 + protein coding gene roundabout guidance receptor 1
D16Mit174 16 72319250 to 72319451 201 DNA segment DNA segment, Chr 16, Massachusetts Institute of Technology 174
Tssr138971 16 72358469 to 72358473 4 + TSS region transcription start site region 138971
Gm49670 16 72372099 to 72372441 342 - pseudogene predicted gene, 49670
D16Ium54 16 72400543 to 72400688 145 DNA segment DNA segment, Chr 16, Indiana University Medical 54
D16Mit27 16 72477491 to 72477597 106 DNA segment DNA segment, Chr 16, Massachusetts Institute of Technology 27
Tssr138972 16 72563384 to 72563395 11 + TSS region transcription start site region 138972
Tssr138973 16 72563412 to 72563421 9 + TSS region transcription start site region 138973
Tssr138974 16 72563508 to 72563540 32 + TSS region transcription start site region 138974
Tssr138975 16 72636899 to 72636900 1 + TSS region transcription start site region 138975
Tssr138976 16 72639607 to 72639611 4 + TSS region transcription start site region 138976
Gm29908 16 72654929 to 72663066 8137 - lncRNA gene predicted gene, 29908
Cpgi8366 16 72662974 to 72664294 1320 CpG island CpG island 8366
Tssr138977 16 72663031 to 72663044 13 + TSS region transcription start site region 138977
Tssr138978 16 72663048 to 72663065 17 + TSS region transcription start site region 138978
Tssr138979 16 72663116 to 72663127 11 + TSS region transcription start site region 138979
Tssr138980 16 72663143 to 72663189 46 + TSS region transcription start site region 138980
Tssr138981 16 72663197 to 72663210 13 + TSS region transcription start site region 138981
Tssr138982 16 72663544 to 72663622 78 + TSS region transcription start site region 138982
Tssr138983 16 72663743 to 72663754 11 + TSS region transcription start site region 138983
Tssr138984 16 72663787 to 72663815 28 + TSS region transcription start site region 138984
Tssr138985 16 72669508 to 72669512 4 + TSS region transcription start site region 138985
C030046M01Rik 16 72731487 to 72732553 1066 unclassified gene RIKEN cDNA C030046M01 gene
Tssr138986 16 72765070 to 72765076 6 + TSS region transcription start site region 138986
Tssr138987 16 72777047 to 72777052 5 + TSS region transcription start site region 138987
Tssr138988 16 72788400 to 72788401 1 + TSS region transcription start site region 138988
D230034L24Rik 16 72797806 to 72802004 4198 unclassified gene RIKEN cDNA D230034L24 gene
Tssr141723 16 72823665 to 72823666 1 - TSS region transcription start site region 141723
Lith14 16 72864958 to 72865073 115 QTL lithogenic gene 14
D16Mit65 16 72864958 to 72865073 115 DNA segment DNA segment, Chr 16, Massachusetts Institute of Technology 65
Cpgi8367 16 72894502 to 72894767 265 CpG island CpG island 8367
D16Mit151 16 72922765 to 72922896 131 DNA segment DNA segment, Chr 16, Massachusetts Institute of Technology 151
Tssr138989 16 72930933 to 72930937 4 + TSS region transcription start site region 138989
Tssr4935 16 72957461 to 72957466 5 + TSS region transcription start site region 4935
Tssr138990 16 72982944 to 72982945 1 + TSS region transcription start site region 138990
D16Mit187 16 73000593 to 73000702 109 DNA segment DNA segment, Chr 16, Massachusetts Institute of Technology 187
Tssr138991 16 73011592 to 73011605 13 + TSS region transcription start site region 138991
Tssr138992 16 73011607 to 73011621 14 + TSS region transcription start site region 138992
Tssr138993 16 73045333 to 73045349 16 + TSS region transcription start site region 138993
Tssr138994 16 73045776 to 73045788 12 + TSS region transcription start site region 138994
4930500H12Rik 16 73072346 to 73410430 338084 + lncRNA gene RIKEN cDNA 4930500H12 gene
Tssr138995 16 73072363 to 73072366 3 + TSS region transcription start site region 138995
Tssr138996 16 73072369 to 73072382 13 + TSS region transcription start site region 138996
Tssr138997 16 73072389 to 73072400 11 + TSS region transcription start site region 138997
Tssr4936 16 73086444 to 73086445 1 + TSS region transcription start site region 4936
D16Mit202 16 73127308 to 73127497 189 DNA segment DNA Segment, Chr 16, Massachusetts Institute of Technology 202
Tssr138998 16 73202097 to 73202098 1 + TSS region transcription start site region 138998
D16Mit141.2 16 73228347 to 73228461 114 DNA segment DNA segment, Chr 16, Massachusetts Institute of Technology 141.2
D16Mit141 16 73228503 to 73228579 76 DNA segment DNA segment, Chr 16, Massachusetts Institute of Technology 141
D16Mit116 16 73332909 to 73333034 125 DNA segment DNA segment, Chr 16, Massachusetts Institute of Technology 116
Gm25699 16 73422793 to 73422959 166 - snRNA gene predicted gene, 25699
Gm18825 16 73463807 to 73464823 1016 - pseudogene predicted gene, 18825
2310066N15Rik 16 73471718 to 73472462 744 unclassified gene RIKEN cDNA 2310066N15 gene
Gm41472 16 73481105 to 73508146 27041 + lncRNA gene predicted gene, 41472
Gm49680 16 73484857 to 73485315 458 + pseudogene predicted gene, 49680
Tssr138999 16 73497317 to 73497328 11 + TSS region transcription start site region 138999
D16Mit117 16 73512390 to 73512527 137 DNA segment DNA segment, Chr 16, Massachusetts Institute of Technology 117
D16Mit117.1 16 73512516 to 73512634 118 DNA segment DNA segment, Chr 16, Massachusetts Institute of Technology 117.1