Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 16:7207870-8327879

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30 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Rbfox1 16 5885355 to 7411526 1526171 + protein coding gene RNA binding protein, fox-1 homolog (C. elegans) 1
Tssr136978 16 7217661 to 7217671 10 + TSS region transcription start site region 136978
Tssr136979 16 7217684 to 7217712 28 + TSS region transcription start site region 136979
Tssr136980 16 7217715 to 7217724 9 + TSS region transcription start site region 136980
Tssr136981 16 7217728 to 7217733 5 + TSS region transcription start site region 136981
Tssr136982 16 7217752 to 7217760 8 + TSS region transcription start site region 136982
Tssr136983 16 7224305 to 7224317 12 + TSS region transcription start site region 136983
Tssr136984 16 7224324 to 7224335 11 + TSS region transcription start site region 136984
Tssr136985 16 7224408 to 7224417 9 + TSS region transcription start site region 136985
Tssr136986 16 7278189 to 7278225 36 + TSS region transcription start site region 136986
D16Mit131.3 16 7318951 to 7319083 132 DNA segment DNA segment, Chr 16, Massachusetts Institute of Technology 131.3
D16Mit131 16 7319042 to 7319181 139 DNA segment DNA segment, Chr 16, Massachusetts Institute of Technology 131
D16Dcr2 16 7319072 to 7319182 110 DNA segment DNA Segment, Chr 16, Derry C. Roopenian 2
D16Mit163 16 7328633 to 7328747 114 DNA segment DNA segment, Chr 16, Massachusetts Institute of Technology 163
Tssr136987 16 7341519 to 7341524 5 + TSS region transcription start site region 136987
Tssr136988 16 7409781 to 7409794 13 + TSS region transcription start site region 136988
Nhdlq10 16 7445880 to 7445989 109 QTL non-HDL QTL 10
Heal11 16 7445880 to 7445989 109 QTL wound healing/regeneration 11
D16Mit122 16 7445880 to 7445989 109 DNA segment DNA segment, Chr 16, Massachusetts Institute of Technology 122
Gm49533 16 7708736 to 7709066 330 - pseudogene predicted gene, 49533
Tssr4787 16 7767870 to 7767879 9 + TSS region transcription start site region 4787
Gm29854 16 7767891 to 7771595 3704 + lncRNA gene predicted gene, 29854
Tssr136989 16 7828205 to 7828208 3 + TSS region transcription start site region 136989
Gm49534 16 7870102 to 7879859 9757 + lincRNA gene predicted gene, 49534
Tssr139854 16 7951666 to 7951676 10 - TSS region transcription start site region 139854
D16Mit142 16 7983236 to 7983378 142 DNA segment DNA segment, Chr 16, Massachusetts Institute of Technology 142
Gm49535 16 8103374 to 8103788 414 - pseudogene predicted gene, 49535
Gm23476 16 8203975 to 8204248 273 + unclassified non-coding RNA gene predicted gene, 23476
Dice1a 16 11139842 to 7983236 -3156606 QTL determination of interleukin 4 commitment 1a
Nilac10 16 29406653 to 7319042 -22087611 QTL nicotine induced locomotor activity 10