Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 16:71303204-72934443

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51 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Dice1b 16 45690637 to 72477597 26786960 QTL determination of interleukin 4 commitment 1b
Gm22797 16 71663788 to 71663918 130 + snoRNA gene predicted gene, 22797
Gm18549 16 71854938 to 71855780 842 - pseudogene predicted gene, 18549
Gm18550 16 71857257 to 71858238 981 + pseudogene predicted gene, 18550
Tssr4934 16 71868951 to 71868953 2 + TSS region transcription start site region 4934
Gm49667 16 71879044 to 71879229 185 + pseudogene predicted gene, 49667
Tssr138963 16 72027461 to 72027470 9 + TSS region transcription start site region 138963
Tssr138964 16 72027507 to 72027526 19 + TSS region transcription start site region 138964
Tssr138965 16 72027602 to 72027613 11 + TSS region transcription start site region 138965
Tssr138966 16 72027627 to 72027644 17 + TSS region transcription start site region 138966
Tssr138967 16 72027649 to 72027670 21 + TSS region transcription start site region 138967
Tssr138968 16 72027683 to 72027694 11 + TSS region transcription start site region 138968
Tssr138969 16 72027707 to 72027720 13 + TSS region transcription start site region 138969
Cpgi8365 16 72028834 to 72029262 428 CpG island CpG island 8365
Tssr138970 16 72083108 to 72083111 3 + TSS region transcription start site region 138970
3110049I03Rik 16 72118204 to 72119443 1239 unclassified gene RIKEN cDNA 3110049I03 gene
8030451O07Rik 16 72226383 to 72234327 7944 - lincRNA gene RIKEN cDNA 8030451O07 gene
Tssr141722 16 72264401 to 72264405 4 - TSS region transcription start site region 141722
Robo1 16 72308306 to 73046095 737789 + protein coding gene roundabout guidance receptor 1
D16Mit174 16 72319250 to 72319451 201 DNA segment DNA segment, Chr 16, Massachusetts Institute of Technology 174
Tssr138971 16 72358469 to 72358473 4 + TSS region transcription start site region 138971
Gm49670 16 72372099 to 72372441 342 - pseudogene predicted gene, 49670
D16Ium54 16 72400543 to 72400688 145 DNA segment DNA segment, Chr 16, Indiana University Medical 54
D16Mit27 16 72477491 to 72477597 106 DNA segment DNA segment, Chr 16, Massachusetts Institute of Technology 27
Tssr138972 16 72563384 to 72563395 11 + TSS region transcription start site region 138972
Tssr138973 16 72563412 to 72563421 9 + TSS region transcription start site region 138973
Tssr138974 16 72563508 to 72563540 32 + TSS region transcription start site region 138974
Tssr138975 16 72636899 to 72636900 1 + TSS region transcription start site region 138975
Tssr138976 16 72639607 to 72639611 4 + TSS region transcription start site region 138976
Gm29908 16 72654929 to 72663066 8137 - lncRNA gene predicted gene, 29908
Cpgi8366 16 72662974 to 72664294 1320 CpG island CpG island 8366
Tssr138977 16 72663031 to 72663044 13 + TSS region transcription start site region 138977
Tssr138978 16 72663048 to 72663065 17 + TSS region transcription start site region 138978
Tssr138979 16 72663116 to 72663127 11 + TSS region transcription start site region 138979
Tssr138980 16 72663143 to 72663189 46 + TSS region transcription start site region 138980
Tssr138981 16 72663197 to 72663210 13 + TSS region transcription start site region 138981
Tssr138982 16 72663544 to 72663622 78 + TSS region transcription start site region 138982
Tssr138983 16 72663743 to 72663754 11 + TSS region transcription start site region 138983
Tssr138984 16 72663787 to 72663815 28 + TSS region transcription start site region 138984
Tssr138985 16 72669508 to 72669512 4 + TSS region transcription start site region 138985
C030046M01Rik 16 72731487 to 72732553 1066 unclassified gene RIKEN cDNA C030046M01 gene
Tssr138986 16 72765070 to 72765076 6 + TSS region transcription start site region 138986
Tssr138987 16 72777047 to 72777052 5 + TSS region transcription start site region 138987
Tssr138988 16 72788400 to 72788401 1 + TSS region transcription start site region 138988
D230034L24Rik 16 72797806 to 72802004 4198 unclassified gene RIKEN cDNA D230034L24 gene
Tssr141723 16 72823665 to 72823666 1 - TSS region transcription start site region 141723
D16Mit65 16 72864958 to 72865073 115 DNA segment DNA segment, Chr 16, Massachusetts Institute of Technology 65
Lith14 16 72864958 to 72865073 115 QTL lithogenic gene 14
Cpgi8367 16 72894502 to 72894767 265 CpG island CpG island 8367
D16Mit151 16 72922765 to 72922896 131 DNA segment DNA segment, Chr 16, Massachusetts Institute of Technology 151
Tssr138989 16 72930933 to 72930937 4 + TSS region transcription start site region 138989