Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 16:67547635-69067821

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36 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cadm2 16 66655421 to 67620908 965487 - protein coding gene cell adhesion molecule 2
Tssr141705 16 67584135 to 67584140 5 - TSS region transcription start site region 141705
Tssr141706 16 67588663 to 67588665 2 - TSS region transcription start site region 141706
Gm15828 16 67592705 to 67593226 521 - pseudogene predicted gene 15828
Tssr141707 16 67594781 to 67594808 27 - TSS region transcription start site region 141707
D16Ium50 16 67600113 to 67600420 307 DNA segment DNA segment, Chr 16, Indiana University Medical 50
Tssr141708 16 67602557 to 67602578 21 - TSS region transcription start site region 141708
Tssr141709 16 67602615 to 67602634 19 - TSS region transcription start site region 141709
Tssr141710 16 67605999 to 67606005 6 - TSS region transcription start site region 141710
Cpgi8360 16 67617824 to 67618207 383 CpG island CpG island 8360
Tssr141711 16 67618787 to 67618791 4 - TSS region transcription start site region 141711
Cpgi8361 16 67619614 to 67621313 1699 CpG island CpG island 8361
Tssr4929 16 67620635 to 67620671 36 - TSS region transcription start site region 4929
Tssr4930 16 67620760 to 67620795 35 - TSS region transcription start site region 4930
Tssr141712 16 67620805 to 67620816 11 - TSS region transcription start site region 141712
Tssr141713 16 67620880 to 67620922 42 - TSS region transcription start site region 141713
Tssr141714 16 67620923 to 67620932 9 - TSS region transcription start site region 141714
D16Mit66 16 67628813 to 67629022 209 DNA segment DNA segment, Chr 16, Massachusetts Institute of Technology 66
Tssr138932 16 67648568 to 67648574 6 + TSS region transcription start site region 138932
Gm49648 16 67701673 to 67741117 39444 - lincRNA gene predicted gene, 49648
D16Mit76 16 67719260 to 67719347 87 DNA segment DNA segment, Chr 16, Massachusetts Institute of Technology 76
Gm49649 16 68006962 to 68007361 399 - pseudogene predicted gene, 49649
Gm18495 16 68051255 to 68051807 552 + pseudogene predicted gene, 18495
Tssr4931 16 68104319 to 68104321 2 + TSS region transcription start site region 4931
Tssr4932 16 68129711 to 68129713 2 + TSS region transcription start site region 4932
Gm49650 16 68164459 to 68164855 396 - pseudogene predicted gene, 49650
D16Ium59 16 68307635 to 68307821 186 DNA segment DNA segment, Chr 16, Indiana University Medical 59
Gm24681 16 68452859 to 68452965 106 - snoRNA gene predicted gene, 24681
D16Ium63 16 68472675 to 68472838 163 DNA segment DNA segment, Chr 16, Indiana University Medical 63
Gm49651 16 68510935 to 68511169 234 + pseudogene predicted gene, 49651
Tssr138933 16 68888311 to 68888346 35 + TSS region transcription start site region 138933
Gm46542 16 68888346 to 68888595 249 + pseudogene predicted gene, 46542
D16Ium55 16 68895359 to 68895652 293 DNA segment DNA segment, Chr 16, Indiana University Medical 55
Gm23591 16 68901896 to 68902181 285 + unclassified non-coding RNA gene predicted gene, 23591
D16Mit200 16 68969902 to 68969997 95 DNA segment DNA Segment, Chr 16, Massachusetts Institute of Technology 200
Gm18496 16 68999446 to 69000108 662 + pseudogene predicted gene, 18496