Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 16:66630880-68610922

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52 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cadm2 16 66655421 to 67620908 965487 - protein coding gene cell adhesion molecule 2
Tssr138930 16 66657107 to 66657142 35 + TSS region transcription start site region 138930
1700010K23Rik 16 66657118 to 66664626 7508 + antisense lncRNA gene RIKEN cDNA 1700010K23 gene
Tssr141693 16 66744588 to 66744601 13 - TSS region transcription start site region 141693
Tssr138931 16 66852633 to 66852635 2 + TSS region transcription start site region 138931
Tssr141694 16 66865429 to 66865432 3 - TSS region transcription start site region 141694
4933411O13Rik 16 66892503 to 66910841 18338 + antisense lncRNA gene RIKEN cDNA 4933411O13 gene
2900041H08Rik 16 66951233 to 66951412 179 unclassified gene RIKEN cDNA 2900041H08 gene
D16Mit222 16 67013694 to 67013867 173 DNA segment DNA Segment, Chr 16, Massachusetts Institute of Technology 222
Tssr141695 16 67016255 to 67016258 3 - TSS region transcription start site region 141695
D16Mit105 16 67068507 to 67068621 114 DNA segment DNA segment, Chr 16, Massachusetts Institute of Technology 105
Tssr141696 16 67072627 to 67072630 3 - TSS region transcription start site region 141696
Tssr141697 16 67112636 to 67112644 8 - TSS region transcription start site region 141697
Tssr141698 16 67182834 to 67182838 4 - TSS region transcription start site region 141698
Tssr141699 16 67197537 to 67197542 5 - TSS region transcription start site region 141699
Gm49640 16 67238128 to 67238350 222 - pseudogene predicted gene, 49640
D16Mit215 16 67243956 to 67244080 124 DNA segment DNA Segment, Chr 16 Massachusetts Institute of Technology 215
Tssr141700 16 67278268 to 67278272 4 - TSS region transcription start site region 141700
9330155M09Rik 16 67443102 to 67446021 2919 - unclassified gene RIKEN cDNA 9330155M09 gene
Tssr141701 16 67518265 to 67518268 3 - TSS region transcription start site region 141701
Tssr141702 16 67519506 to 67519522 16 - TSS region transcription start site region 141702
Tssr141703 16 67545838 to 67545850 12 - TSS region transcription start site region 141703
Tssr141704 16 67545957 to 67545964 7 - TSS region transcription start site region 141704
Tssr141705 16 67584135 to 67584140 5 - TSS region transcription start site region 141705
Tssr141706 16 67588663 to 67588665 2 - TSS region transcription start site region 141706
Gm15828 16 67592705 to 67593226 521 - pseudogene predicted gene 15828
Tssr141707 16 67594781 to 67594808 27 - TSS region transcription start site region 141707
D16Ium50 16 67600113 to 67600420 307 DNA segment DNA segment, Chr 16, Indiana University Medical 50
Tssr141708 16 67602557 to 67602578 21 - TSS region transcription start site region 141708
Tssr141709 16 67602615 to 67602634 19 - TSS region transcription start site region 141709
Tssr141710 16 67605999 to 67606005 6 - TSS region transcription start site region 141710
Cpgi8360 16 67617824 to 67618207 383 CpG island CpG island 8360
Tssr141711 16 67618787 to 67618791 4 - TSS region transcription start site region 141711
Cpgi8361 16 67619614 to 67621313 1699 CpG island CpG island 8361
Tssr4929 16 67620635 to 67620671 36 - TSS region transcription start site region 4929
Tssr4930 16 67620760 to 67620795 35 - TSS region transcription start site region 4930
Tssr141712 16 67620805 to 67620816 11 - TSS region transcription start site region 141712
Tssr141713 16 67620880 to 67620922 42 - TSS region transcription start site region 141713
Tssr141714 16 67620923 to 67620932 9 - TSS region transcription start site region 141714
D16Mit66 16 67628813 to 67629022 209 DNA segment DNA segment, Chr 16, Massachusetts Institute of Technology 66
Tssr138932 16 67648568 to 67648574 6 + TSS region transcription start site region 138932
Gm49648 16 67701673 to 67741117 39444 - lincRNA gene predicted gene, 49648
D16Mit76 16 67719260 to 67719347 87 DNA segment DNA segment, Chr 16, Massachusetts Institute of Technology 76
Gm49649 16 68006962 to 68007361 399 - pseudogene predicted gene, 49649
Gm18495 16 68051255 to 68051807 552 + pseudogene predicted gene, 18495
Tssr4931 16 68104319 to 68104321 2 + TSS region transcription start site region 4931
Tssr4932 16 68129711 to 68129713 2 + TSS region transcription start site region 4932
Gm49650 16 68164459 to 68164855 396 - pseudogene predicted gene, 49650
D16Ium59 16 68307635 to 68307821 186 DNA segment DNA segment, Chr 16, Indiana University Medical 59
Gm24681 16 68452859 to 68452965 106 - snoRNA gene predicted gene, 24681
D16Ium63 16 68472675 to 68472838 163 DNA segment DNA segment, Chr 16, Indiana University Medical 63
Gm49651 16 68510935 to 68511169 234 + pseudogene predicted gene, 49651