Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 16:65799515-66840069

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32 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi8359 16 65814827 to 65816039 1212 CpG island CpG island 8359
Tssr138912 16 65815067 to 65815087 20 + TSS region transcription start site region 138912
Tssr138913 16 65815169 to 65815196 27 + TSS region transcription start site region 138913
Tssr138914 16 65815198 to 65815268 70 + TSS region transcription start site region 138914
Vgll3 16 65815257 to 65866368 51111 + protein coding gene vestigial like family member 3
Tssr138915 16 65815277 to 65815286 9 + TSS region transcription start site region 138915
Tssr138916 16 65815404 to 65815409 5 + TSS region transcription start site region 138916
Tssr138917 16 65815508 to 65815522 14 + TSS region transcription start site region 138917
Tssr138918 16 65815817 to 65815841 24 + TSS region transcription start site region 138918
Tssr138919 16 65815847 to 65815860 13 + TSS region transcription start site region 138919
Tssr138920 16 65815992 to 65816005 13 + TSS region transcription start site region 138920
Tssr138921 16 65816023 to 65816038 15 + TSS region transcription start site region 138921
Tssr138922 16 65818653 to 65818659 6 + TSS region transcription start site region 138922
Tssr138923 16 65819743 to 65819745 2 + TSS region transcription start site region 138923
Tssr138924 16 65828616 to 65828625 9 + TSS region transcription start site region 138924
Tssr138925 16 65828646 to 65828670 24 + TSS region transcription start site region 138925
Tssr138926 16 65839371 to 65839407 36 + TSS region transcription start site region 138926
Tssr138927 16 65839807 to 65839811 4 + TSS region transcription start site region 138927
Gm7366 16 65914961 to 65915591 630 + pseudogene predicted gene 7366
Gm18238 16 65917947 to 65921204 3257 + pseudogene predicted gene, 18238
Gm49635 16 65947106 to 65947427 321 + pseudogene predicted gene, 49635
Gm22217 16 65961225 to 65961537 312 + unclassified non-coding RNA gene predicted gene, 22217
D16Mit120 16 66078457 to 66078797 340 DNA segment DNA segment, Chr 16, Massachusetts Institute of Technology 120
Gm22448 16 66254786 to 66254892 106 + snRNA gene predicted gene, 22448
Tssr138928 16 66272675 to 66272678 3 + TSS region transcription start site region 138928
Tssr138929 16 66288543 to 66288546 3 + TSS region transcription start site region 138929
Gm18019 16 66319515 to 66320069 554 - pseudogene predicted gene, 18019
D16Mit149 16 66487250 to 66487374 124 DNA segment DNA segment, Chr 16, Massachusetts Institute of Technology 149
Cadm2 16 66655421 to 67620908 965487 - protein coding gene cell adhesion molecule 2
Tssr138930 16 66657107 to 66657142 35 + TSS region transcription start site region 138930
1700010K23Rik 16 66657118 to 66664626 7508 + antisense lncRNA gene RIKEN cDNA 1700010K23 gene
Tssr141693 16 66744588 to 66744601 13 - TSS region transcription start site region 141693