Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 16:65584515-67055069

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47 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Arrd3 16 32704091 to 65669666 32965575 QTL age-related retinal degeneration 3
Gm49633 16 65613122 to 65613419 297 - pseudogene predicted gene, 49633
Tssr138910 16 65649412 to 65649419 7 + TSS region transcription start site region 138910
Tssr138911 16 65665077 to 65665104 27 + TSS region transcription start site region 138911
D16Mit139 16 65669517 to 65669666 149 DNA segment DNA segment, Chr 16, Massachusetts Institute of Technology 139
Lp1 16 65669666 to 6725115 -58944551 QTL lymphocyte proliferation 1
Gm41469 16 65723742 to 65735346 11604 + lncRNA gene predicted gene, 41469
Gm41470 16 65737334 to 65754356 17022 + lncRNA gene predicted gene, 41470
Gm5221 16 65793371 to 65794337 966 + pseudogene predicted gene 5221
Cpgi8359 16 65814827 to 65816039 1212 CpG island CpG island 8359
Tssr138912 16 65815067 to 65815087 20 + TSS region transcription start site region 138912
Tssr138913 16 65815169 to 65815196 27 + TSS region transcription start site region 138913
Tssr138914 16 65815198 to 65815268 70 + TSS region transcription start site region 138914
Vgll3 16 65815257 to 65866368 51111 + protein coding gene vestigial like family member 3
Tssr138915 16 65815277 to 65815286 9 + TSS region transcription start site region 138915
Tssr138916 16 65815404 to 65815409 5 + TSS region transcription start site region 138916
Tssr138917 16 65815508 to 65815522 14 + TSS region transcription start site region 138917
Tssr138918 16 65815817 to 65815841 24 + TSS region transcription start site region 138918
Tssr138919 16 65815847 to 65815860 13 + TSS region transcription start site region 138919
Tssr138920 16 65815992 to 65816005 13 + TSS region transcription start site region 138920
Tssr138921 16 65816023 to 65816038 15 + TSS region transcription start site region 138921
Tssr138922 16 65818653 to 65818659 6 + TSS region transcription start site region 138922
Tssr138923 16 65819743 to 65819745 2 + TSS region transcription start site region 138923
Tssr138924 16 65828616 to 65828625 9 + TSS region transcription start site region 138924
Tssr138925 16 65828646 to 65828670 24 + TSS region transcription start site region 138925
Tssr138926 16 65839371 to 65839407 36 + TSS region transcription start site region 138926
Tssr138927 16 65839807 to 65839811 4 + TSS region transcription start site region 138927
Gm7366 16 65914961 to 65915591 630 + pseudogene predicted gene 7366
Gm18238 16 65917947 to 65921204 3257 + pseudogene predicted gene, 18238
Gm49635 16 65947106 to 65947427 321 + pseudogene predicted gene, 49635
Gm22217 16 65961225 to 65961537 312 + unclassified non-coding RNA gene predicted gene, 22217
D16Mit120 16 66078457 to 66078797 340 DNA segment DNA segment, Chr 16, Massachusetts Institute of Technology 120
Gm22448 16 66254786 to 66254892 106 + snRNA gene predicted gene, 22448
Tssr138928 16 66272675 to 66272678 3 + TSS region transcription start site region 138928
Tssr138929 16 66288543 to 66288546 3 + TSS region transcription start site region 138929
Gm18019 16 66319515 to 66320069 554 - pseudogene predicted gene, 18019
D16Mit149 16 66487250 to 66487374 124 DNA segment DNA segment, Chr 16, Massachusetts Institute of Technology 149
Cadm2 16 66655421 to 67620908 965487 - protein coding gene cell adhesion molecule 2
Tssr138930 16 66657107 to 66657142 35 + TSS region transcription start site region 138930
1700010K23Rik 16 66657118 to 66664626 7508 + antisense lncRNA gene RIKEN cDNA 1700010K23 gene
Tssr141693 16 66744588 to 66744601 13 - TSS region transcription start site region 141693
Tssr138931 16 66852633 to 66852635 2 + TSS region transcription start site region 138931
Tssr141694 16 66865429 to 66865432 3 - TSS region transcription start site region 141694
4933411O13Rik 16 66892503 to 66910841 18338 + antisense lncRNA gene RIKEN cDNA 4933411O13 gene
2900041H08Rik 16 66951233 to 66951412 179 unclassified gene RIKEN cDNA 2900041H08 gene
D16Mit222 16 67013694 to 67013867 173 DNA segment DNA Segment, Chr 16, Massachusetts Institute of Technology 222
Tssr141695 16 67016255 to 67016258 3 - TSS region transcription start site region 141695