Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 16:65420629-65633981

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24 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
D16Mit48 16 65429310 to 65429469 159 DNA segment DNA segment, Chr 16, Massachusetts Institute of Technology 48
Gm23659 16 65432137 to 65432246 109 + miRNA gene predicted gene, 23659
Tssr138899 16 65473453 to 65473458 5 + TSS region transcription start site region 138899
Tssr138900 16 65473720 to 65473736 16 + TSS region transcription start site region 138900
Tssr138901 16 65473789 to 65473805 16 + TSS region transcription start site region 138901
Tssr138902 16 65473924 to 65473939 15 + TSS region transcription start site region 138902
Tssr141689 16 65515100 to 65515105 5 - TSS region transcription start site region 141689
Gm49631 16 65520284 to 65526171 5887 - lincRNA gene predicted gene, 49631
Tssr138903 16 65520503 to 65520518 15 + TSS region transcription start site region 138903
Tssr4928 16 65520602 to 65520607 5 + TSS region transcription start site region 4928
Pou1f1 16 65520629 to 65533981 13352 + protein coding gene POU domain, class 1, transcription factor 1
Tssr138904 16 65520686 to 65520697 11 + TSS region transcription start site region 138904
Tssr138905 16 65523307 to 65523314 7 + TSS region transcription start site region 138905
Tssr138906 16 65523571 to 65523583 12 + TSS region transcription start site region 138906
Tssr138907 16 65533983 to 65533995 12 + TSS region transcription start site region 138907
Tssr138908 16 65534002 to 65534011 9 + TSS region transcription start site region 138908
Chmp2b 16 65539133 to 65562697 23564 - protein coding gene charged multivesicular body protein 2B
Cpgi8358 16 65562303 to 65563172 869 CpG island CpG island 8358
Tssr141690 16 65562638 to 65562647 9 - TSS region transcription start site region 141690
Tssr141691 16 65562667 to 65562678 11 - TSS region transcription start site region 141691
Tssr141692 16 65562686 to 65562769 83 - TSS region transcription start site region 141692
Tssr138909 16 65562784 to 65562847 63 + TSS region transcription start site region 138909
Gm36457 16 65562791 to 65563519 728 + protein coding gene predicted gene, 36457
Gm49633 16 65613122 to 65613419 297 - pseudogene predicted gene, 49633