Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 16:64465432-65076334

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32 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Csnka2ip 16 64477810 to 64602366 124556 - protein coding gene casein kinase 2, alpha prime interacting protein
Tssr141676 16 64479234 to 64479240 6 - TSS region transcription start site region 141676
D16Mit173 16 64592052 to 64592170 118 DNA segment DNA segment, Chr 16, Massachusetts Institute of Technology 173
Tssr141677 16 64602323 to 64602363 40 - TSS region transcription start site region 141677
4930453N24Rik 16 64762205 to 64771156 8951 - protein coding gene RIKEN cDNA 4930453N24 gene
Cpgi8355 16 64770432 to 64771334 902 CpG island CpG island 8355
Tssr141678 16 64770916 to 64770971 55 - TSS region transcription start site region 141678
Tssr141679 16 64771125 to 64771136 11 - TSS region transcription start site region 141679
Tssr141680 16 64771146 to 64771184 38 - TSS region transcription start site region 141680
Zfp654 16 64780347 to 64851652 71305 - protein coding gene zinc finger protein 654
2810421E14Rik 16 64821079 to 64822242 1163 unclassified non-coding RNA gene RIKEN cDNA 2810421E14 gene
Cpgi8356 16 64850843 to 64852997 2154 CpG island CpG island 8356
Tssr141681 16 64851433 to 64851446 13 - TSS region transcription start site region 141681
Tssr141682 16 64851653 to 64851754 101 - TSS region transcription start site region 141682
Tssr138888 16 64851954 to 64851959 5 + TSS region transcription start site region 138888
Tssr138889 16 64851971 to 64851982 11 + TSS region transcription start site region 138889
Tssr138890 16 64851991 to 64851996 5 + TSS region transcription start site region 138890
Tssr138891 16 64851998 to 64852074 76 + TSS region transcription start site region 138891
Cggbp1 16 64852001 to 64859491 7490 + protein coding gene CGG triplet repeat binding protein 1
Tssr138892 16 64852308 to 64852350 42 + TSS region transcription start site region 138892
Tssr138893 16 64852356 to 64852388 32 + TSS region transcription start site region 138893
Tssr141683 16 64852521 to 64852543 22 - TSS region transcription start site region 141683
Tssr141684 16 64852548 to 64852562 14 - TSS region transcription start site region 141684
Tssr138894 16 64852816 to 64852864 48 + TSS region transcription start site region 138894
Gm33971 16 64871773 to 64874346 2573 - lncRNA gene predicted gene, 33971
Tssr141685 16 64873929 to 64873942 13 - TSS region transcription start site region 141685
Tssr138895 16 64911196 to 64911198 2 + TSS region transcription start site region 138895
Gm9061 16 64911273 to 64912278 1005 + pseudogene predicted gene 9061
Gm16385 16 64917983 to 64919084 1101 - pseudogene predicted gene 16385
Gm23374 16 64918222 to 64918305 83 - miRNA gene predicted gene, 23374
Tssr141686 16 64919107 to 64919115 8 - TSS region transcription start site region 141686
Htr1f 16 64924729 to 65105784 181055 - protein coding gene 5-hydroxytryptamine (serotonin) receptor 1F