Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 16:60531390-62561666

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39 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Epha6 16 59653483 to 60605531 952048 - protein coding gene Eph receptor A6
Gm9017 16 60604766 to 60611236 6470 + antisense lncRNA gene predicted gene 9017
Cpgi8348 16 60604937 to 60606609 1672 CpG island CpG island 8348
Tssr141655 16 60605226 to 60605229 3 - TSS region transcription start site region 141655
Tssr141656 16 60605243 to 60605254 11 - TSS region transcription start site region 141656
Tssr141657 16 60605271 to 60605291 20 - TSS region transcription start site region 141657
Tssr141658 16 60605545 to 60605559 14 - TSS region transcription start site region 141658
Tssr141659 16 60605591 to 60605609 18 - TSS region transcription start site region 141659
Tssr141660 16 60605611 to 60605643 32 - TSS region transcription start site region 141660
Tssr141661 16 60606467 to 60606487 20 - TSS region transcription start site region 141661
Tssr141662 16 60606488 to 60606517 29 - TSS region transcription start site region 141662
Gm27001 16 60628608 to 60629543 935 + pseudogene predicted gene, 27001
Gm49609 16 60636432 to 60636586 154 - pseudogene predicted gene, 49609
Gm27784 16 60699179 to 60699291 112 - miRNA gene predicted gene, 27784
D16Mit77 16 60880607 to 60880744 137 DNA segment DNA segment, Chr 16, Massachusetts Institute of Technology 77
Tssr141663 16 61056367 to 61056380 13 - TSS region transcription start site region 141663
Tssr4925 16 61056392 to 61056402 10 - TSS region transcription start site region 4925
Gm17065 16 61058761 to 61058999 238 + pseudogene predicted gene 17065
Gm23852 16 61070018 to 61070094 76 + snoRNA gene predicted gene, 23852
Gm17054 16 61105150 to 61105408 258 + pseudogene predicted gene 17054
D16Mit115 16 61192468 to 61192559 91 DNA segment DNA segment, Chr 16, Massachusetts Institute of Technology 115
D16Ium64 16 61262603 to 61262709 106 DNA segment DNA segment, Chr 16, Indiana University Medical 64
Gm49610 16 61358837 to 61359252 415 + pseudogene predicted gene, 49610
n-R5s37 16 61373027 to 61373144 117 - rRNA gene nuclear encoded rRNA 5S 37
Gm9027 16 61377256 to 61377916 660 + pseudogene predicted gene 9027
Tssr141664 16 61389933 to 61389936 3 - TSS region transcription start site region 141664
Gm17192 16 61461005 to 61461472 467 + pseudogene predicted gene 17192
D16Ium40 16 61546390 to 61546666 276 DNA segment DNA segment, Chr 16, Indiana University Medical 40
D16Mit47 16 61562987 to 61563143 156 DNA segment DNA segment, Chr 16, Massachusetts Institute of Technology 47
Remslp3 16 61562987 to 61563143 156 QTL rapid eye movement sleep 3
Imraq3 16 61562987 to 61563143 156 QTL immune response to AAV2 QTL 3
D16Ium67 16 61569334 to 61569532 198 DNA segment DNA segment, Chr 16, Indiana University Medical 67
D16Mit216 16 61833809 to 61833982 173 DNA segment DNA Segment, Chr 16 Massachusetts Institute of Technology 216
Gm18772 16 61846721 to 61847846 1125 + pseudogene predicted gene, 18772
Tssr4926 16 61947319 to 61947320 1 - TSS region transcription start site region 4926
Gm49615 16 62097461 to 62104929 7468 + lincRNA gene predicted gene, 49615
Tssr4927 16 62190454 to 62190458 4 + TSS region transcription start site region 4927
Gm33797 16 62329132 to 62355965 26833 - lncRNA gene predicted gene, 33797
D16Mit172 16 62342022 to 62342196 174 DNA segment DNA segment, Chr 16, Massachusetts Institute of Technology 172