Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 16:59970591-61240609

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28 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Epha6 16 59653483 to 60605531 952048 - protein coding gene Eph receptor A6
Tssr138878 16 60042349 to 60042351 2 + TSS region transcription start site region 138878
D16Mit92 16 60187187 to 60187335 148 DNA segment DNA segment, Chr 16, Massachusetts Institute of Technology 92
Gm24755 16 60369054 to 60369163 109 - miRNA gene predicted gene, 24755
Gm4660 16 60397920 to 60398322 402 - pseudogene predicted gene 4660
D16Mit185.2 16 60476833 to 60476989 156 DNA segment DNA segment, Chr 16, Massachusetts Institute of Technology 185.2
D16Mit185 16 60476985 to 60477070 85 DNA segment DNA segment, Chr 16, Massachusetts Institute of Technology 185
D16Mit148 16 60490378 to 60490482 104 DNA segment DNA segment, Chr 16, Massachusetts Institute of Technology 148
Gm9017 16 60604766 to 60611236 6470 + antisense lncRNA gene predicted gene 9017
Cpgi8348 16 60604937 to 60606609 1672 CpG island CpG island 8348
Tssr141655 16 60605226 to 60605229 3 - TSS region transcription start site region 141655
Tssr141656 16 60605243 to 60605254 11 - TSS region transcription start site region 141656
Tssr141657 16 60605271 to 60605291 20 - TSS region transcription start site region 141657
Tssr141658 16 60605545 to 60605559 14 - TSS region transcription start site region 141658
Tssr141659 16 60605591 to 60605609 18 - TSS region transcription start site region 141659
Tssr141660 16 60605611 to 60605643 32 - TSS region transcription start site region 141660
Tssr141661 16 60606467 to 60606487 20 - TSS region transcription start site region 141661
Tssr141662 16 60606488 to 60606517 29 - TSS region transcription start site region 141662
Gm27001 16 60628608 to 60629543 935 + pseudogene predicted gene, 27001
Gm49609 16 60636432 to 60636586 154 - pseudogene predicted gene, 49609
Gm27784 16 60699179 to 60699291 112 - miRNA gene predicted gene, 27784
D16Mit77 16 60880607 to 60880744 137 DNA segment DNA segment, Chr 16, Massachusetts Institute of Technology 77
Tssr141663 16 61056367 to 61056380 13 - TSS region transcription start site region 141663
Tssr4925 16 61056392 to 61056402 10 - TSS region transcription start site region 4925
Gm17065 16 61058761 to 61058999 238 + pseudogene predicted gene 17065
Gm23852 16 61070018 to 61070094 76 + snoRNA gene predicted gene, 23852
Gm17054 16 61105150 to 61105408 258 + pseudogene predicted gene 17054
D16Mit115 16 61192468 to 61192559 91 DNA segment DNA segment, Chr 16, Massachusetts Institute of Technology 115