Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 16:59435354-59766475

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35 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gabrr3 16 59407382 to 59461739 54357 + protein coding gene gamma-aminobutyric acid (GABA) receptor, rho 3
Orai2-ps 16 59457584 to 59460790 3206 + pseudogene ORAI calcium release-activated calcium modulator 2, pseudogene
Tssr138873 16 59457605 to 59457627 22 + TSS region transcription start site region 138873
1700022E09Rik 16 59466872 to 59469238 2366 - lincRNA gene RIKEN cDNA 1700022E09 gene
Cpgi8345 16 59471644 to 59472257 613 CpG island CpG island 8345
Riox2 16 59471775 to 59492461 20686 + protein coding gene ribosomal oxygenase 2
Tssr138874 16 59471778 to 59471861 83 + TSS region transcription start site region 138874
Tssr4921 16 59471863 to 59471875 12 + TSS region transcription start site region 4921
Crybg3 16 59490775 to 59600979 110204 - protein coding gene beta-gamma crystallin domain containing 3
Tssr141642 16 59492447 to 59492449 2 - TSS region transcription start site region 141642
Tssr141643 16 59495770 to 59495780 10 - TSS region transcription start site region 141643
Tssr4922 16 59505825 to 59505827 2 + TSS region transcription start site region 4922
Tssr138875 16 59538730 to 59538731 1 + TSS region transcription start site region 138875
Tssr141644 16 59557363 to 59557371 8 - TSS region transcription start site region 141644
Tssr141645 16 59557373 to 59557380 7 - TSS region transcription start site region 141645
Tssr141646 16 59557388 to 59557398 10 - TSS region transcription start site region 141646
Tssr141647 16 59557402 to 59557441 39 - TSS region transcription start site region 141647
Tssr4923 16 59557489 to 59557504 15 + TSS region transcription start site region 4923
Tssr4924 16 59559216 to 59559222 6 + TSS region transcription start site region 4924
Tssr141648 16 59600144 to 59600148 4 - TSS region transcription start site region 141648
Cpgi8346 16 59600354 to 59601475 1121 CpG island CpG island 8346
Tssr141649 16 59600979 to 59601059 80 - TSS region transcription start site region 141649
Arl6 16 59613321 to 59639411 26090 - protein coding gene ADP-ribosylation factor-like 6
A930013N22Rik 16 59615992 to 59616902 910 unclassified gene RIKEN cDNA A930013N22 gene
Tssr141650 16 59632525 to 59632541 16 - TSS region transcription start site region 141650
Tssr141651 16 59632550 to 59632555 5 - TSS region transcription start site region 141651
Tssr141652 16 59632569 to 59632583 14 - TSS region transcription start site region 141652
Tssr138876 16 59636941 to 59636949 8 + TSS region transcription start site region 138876
4930547E14Rik 16 59636945 to 59672993 36048 + lncRNA gene RIKEN cDNA 4930547E14 gene
Cpgi8347 16 59638692 to 59639598 906 CpG island CpG island 8347
Tssr141653 16 59639124 to 59639191 67 - TSS region transcription start site region 141653
Tssr138877 16 59639193 to 59639211 18 + TSS region transcription start site region 138877
Tssr141654 16 59639382 to 59639445 63 - TSS region transcription start site region 141654
9330168O09Rik 16 59642028 to 59646309 4281 unclassified gene RIKEN cDNA 9330168O09 gene
Epha6 16 59653483 to 60605531 952048 - protein coding gene Eph receptor A6