Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 16:5937467-6707575

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35 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm36902 16 5946938 to 5950798 3860 - lncRNA gene predicted gene, 36902
Tssr139848 16 5949934 to 5949945 11 - TSS region transcription start site region 139848
Tssr139849 16 5949955 to 5949969 14 - TSS region transcription start site region 139849
1700123O21Rik 16 5975587 to 5998496 22909 + sense intronic lncRNA gene RIKEN cDNA 1700123O21 gene
D16Mit121 16 6001020 to 6001368 348 DNA segment DNA segment, Chr 16, Massachusetts Institute of Technology 121
Tssr136927 16 6042362 to 6042371 9 + TSS region transcription start site region 136927
Tssr136928 16 6068493 to 6068509 16 + TSS region transcription start site region 136928
D16Mit54 16 6073356 to 6073559 203 DNA segment DNA segment, Chr 16, Massachusetts Institute of Technology 54
D16Mit129 16 6079726 to 6079875 149 DNA segment DNA segment, Chr 16, Massachusetts Institute of Technology 129
Tanidd3 16 6079726 to 6079875 149 QTL TallyHo associated non-insulin dependent diabetes mellitus 3
Gm36824 16 6083014 to 6107912 24898 - lncRNA gene predicted gene, 36824
Tssr139850 16 6106679 to 6106682 3 - TSS region transcription start site region 139850
D16Mit108 16 6248008 to 6248154 146 DNA segment DNA segment, Chr 16, Massachusetts Institute of Technology 108
Tssr136929 16 6298890 to 6298922 32 + TSS region transcription start site region 136929
D16Mit181 16 6322467 to 6322575 108 DNA segment DNA segment, Chr 16, Massachusetts Institute of Technology 181
Cpgi7935 16 6348452 to 6349290 838 CpG island CpG island 7935
Tssr136930 16 6348505 to 6348521 16 + TSS region transcription start site region 136930
Tssr136931 16 6348524 to 6348549 25 + TSS region transcription start site region 136931
Tssr136932 16 6348656 to 6348680 24 + TSS region transcription start site region 136932
Tssr136933 16 6348701 to 6348722 21 + TSS region transcription start site region 136933
Tssr136934 16 6348732 to 6348770 38 + TSS region transcription start site region 136934
Tssr136935 16 6349021 to 6349095 74 + TSS region transcription start site region 136935
Tssr4784 16 6349109 to 6349116 7 + TSS region transcription start site region 4784
Tssr136936 16 6349119 to 6349145 26 + TSS region transcription start site region 136936
Tssr136937 16 6349161 to 6349172 11 + TSS region transcription start site region 136937
Tssr136938 16 6460422 to 6460446 24 + TSS region transcription start site region 136938
Tssr136939 16 6503177 to 6503183 6 + TSS region transcription start site region 136939
Tssr136940 16 6517966 to 6517977 11 + TSS region transcription start site region 136940
D16Mit220 16 6518076 to 6518298 222 DNA segment DNA Segment, Chr 16, Massachusetts Institute of Technology 220
Tssr136941 16 6523577 to 6523587 10 + TSS region transcription start site region 136941
Tssr136942 16 6563113 to 6563127 14 + TSS region transcription start site region 136942
D16Mit9 16 6659145 to 6659287 142 DNA segment DNA segment, Chr 16, Massachusetts Institute of Technology 9
Tssr136943 16 6680719 to 6680760 41 + TSS region transcription start site region 136943
Tssr136944 16 6698219 to 6698224 5 + TSS region transcription start site region 136944
Bbq1 16 35200846 to 6659145 -28541701 QTL brain and behavior QTL 1