MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 16:57604679-57904837

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19 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Ipng3	16	22956502 to 57773713	34817211		QTL	imprinted postnatal growth 3
Cmss1	16	57302000 to 57606864	304864	-	protein coding gene	cms small ribosomal subunit 1
Cpgi8338	16	57606381 to 57607271	890		CpG island	CpG island 8338
Tssr141607	16	57606796 to 57606811	15	-	TSS region	transcription start site region 141607
Tssr141608	16	57606816 to 57606879	63	-	TSS region	transcription start site region 141608
Col8a1	16	57624258 to 57754737	130479	-	protein coding gene	collagen, type VIII, alpha 1
Tssr141609	16	57645076 to 57645080	4	-	TSS region	transcription start site region 141609
Cpgi8339	16	57696410 to 57696653	243		CpG island	CpG island 8339
Cpgi8340	16	57754679 to 57754837	158		CpG island	CpG island 8340
Tssr141610	16	57754707 to 57754724	17	-	TSS region	transcription start site region 141610
Gm49577	16	57761481 to 57762158	677	-	pseudogene	predicted gene, 49577
Gm5674	16	57768778 to 57769248	470	-	pseudogene	predicted gene 5674
D16Mit5	16	57773560 to 57773713	153		DNA segment	DNA segment, Chr 16, Massachusetts Institute of Technology 5
Pcd4ts3	16	57773560 to 57773713	153		QTL	p-glycoprotein positive CD4 T cell subset 3
Gm49575	16	57811487 to 58042341	230854	+	lincRNA gene	predicted gene, 49575
Gm24039	16	57884008 to 57884139	131	-	snoRNA gene	predicted gene, 24039
Tssr4918	16	57888059 to 57888062	3	+	TSS region	transcription start site region 4918
Rpl7a-ps4	16	57896806 to 57897597	791	-	pseudogene	ribosomal protein 7A, pseudogene 4
Gm37458	16	57902933 to 57903342	409	+	unclassified gene	predicted gene, 37458