Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 16:57584008-58184139

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23 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Ipng3 16 22956502 to 57773713 34817211 QTL imprinted postnatal growth 3
Cmss1 16 57302000 to 57606864 304864 - protein coding gene cms small ribosomal subunit 1
Gm45967 16 57561428 to 57599987 38559 - lncRNA gene predicted gene, 45967
Cpgi8338 16 57606381 to 57607271 890 CpG island CpG island 8338
Tssr141607 16 57606796 to 57606811 15 - TSS region transcription start site region 141607
Tssr141608 16 57606816 to 57606879 63 - TSS region transcription start site region 141608
Col8a1 16 57624258 to 57754737 130479 - protein coding gene collagen, type VIII, alpha 1
Tssr141609 16 57645076 to 57645080 4 - TSS region transcription start site region 141609
Cpgi8339 16 57696410 to 57696653 243 CpG island CpG island 8339
Cpgi8340 16 57754679 to 57754837 158 CpG island CpG island 8340
Tssr141610 16 57754707 to 57754724 17 - TSS region transcription start site region 141610
Gm49577 16 57761481 to 57762158 677 - pseudogene predicted gene, 49577
Gm5674 16 57768778 to 57769248 470 - pseudogene predicted gene 5674
D16Mit5 16 57773560 to 57773713 153 DNA segment DNA segment, Chr 16, Massachusetts Institute of Technology 5
Pcd4ts3 16 57773560 to 57773713 153 QTL p-glycoprotein positive CD4 T cell subset 3
Gm49575 16 57811487 to 58042341 230854 + lincRNA gene predicted gene, 49575
Gm24039 16 57884008 to 57884139 131 - snoRNA gene predicted gene, 24039
Tssr4918 16 57888059 to 57888062 3 + TSS region transcription start site region 4918
Rpl7a-ps4 16 57896806 to 57897597 791 - pseudogene ribosomal protein 7A, pseudogene 4
Gm37458 16 57902933 to 57903342 409 + unclassified gene predicted gene, 37458
Gm49576 16 57993538 to 58006023 12485 - lincRNA gene predicted gene, 49576
Tssr141611 16 58082950 to 58082984 34 - TSS region transcription start site region 141611
Gm41463 16 58147018 to 58148684 1666 - lncRNA gene predicted gene, 41463