Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 16:57377270-57767297

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37 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cmss1 16 57302000 to 57606864 304864 - protein coding gene cms small ribosomal subunit 1
Filip1l 16 57353277 to 57572804 219527 + protein coding gene filamin A interacting protein 1-like
Tssr141603 16 57391453 to 57391492 39 - TSS region transcription start site region 141603
Tssr138833 16 57391474 to 57391509 35 + TSS region transcription start site region 138833
Cpgi8336 16 57391484 to 57391731 247 CpG island CpG island 8336
Tssr141604 16 57391527 to 57391557 30 - TSS region transcription start site region 141604
Tssr141605 16 57391669 to 57391683 14 - TSS region transcription start site region 141605
Tssr4917 16 57397712 to 57397739 27 + TSS region transcription start site region 4917
Tssr141606 16 57421054 to 57421059 5 - TSS region transcription start site region 141606
Gm20956 16 57425402 to 57425951 549 - pseudogene predicted gene, 20956
Tssr138834 16 57443391 to 57443395 4 + TSS region transcription start site region 138834
Tssr138835 16 57449138 to 57449141 3 + TSS region transcription start site region 138835
D16Mit64 16 57459493 to 57459712 219 DNA segment DNA segment, Chr 16, Massachusetts Institute of Technology 64
Tssr138836 16 57471335 to 57471348 13 + TSS region transcription start site region 138836
Tssr138837 16 57498171 to 57498175 4 + TSS region transcription start site region 138837
Cpgi8337 16 57548964 to 57549555 591 CpG island CpG island 8337
Tssr138838 16 57549205 to 57549217 12 + TSS region transcription start site region 138838
Tssr138839 16 57549232 to 57549264 32 + TSS region transcription start site region 138839
Gm45967 16 57561428 to 57599987 38559 - lncRNA gene predicted gene, 45967
Tssr138840 16 57569702 to 57569724 22 + TSS region transcription start site region 138840
Tssr138841 16 57569765 to 57569779 14 + TSS region transcription start site region 138841
Tssr138842 16 57569852 to 57569866 14 + TSS region transcription start site region 138842
Tssr138843 16 57570670 to 57570691 21 + TSS region transcription start site region 138843
Tssr138844 16 57572051 to 57572076 25 + TSS region transcription start site region 138844
Tssr138845 16 57572166 to 57572179 13 + TSS region transcription start site region 138845
Tssr138846 16 57572270 to 57572297 27 + TSS region transcription start site region 138846
Tssr138847 16 57572304 to 57572332 28 + TSS region transcription start site region 138847
Tssr138848 16 57572333 to 57572349 16 + TSS region transcription start site region 138848
Cpgi8338 16 57606381 to 57607271 890 CpG island CpG island 8338
Tssr141607 16 57606796 to 57606811 15 - TSS region transcription start site region 141607
Tssr141608 16 57606816 to 57606879 63 - TSS region transcription start site region 141608
Col8a1 16 57624258 to 57754737 130479 - protein coding gene collagen, type VIII, alpha 1
Tssr141609 16 57645076 to 57645080 4 - TSS region transcription start site region 141609
Cpgi8339 16 57696410 to 57696653 243 CpG island CpG island 8339
Cpgi8340 16 57754679 to 57754837 158 CpG island CpG island 8340
Tssr141610 16 57754707 to 57754724 17 - TSS region transcription start site region 141610
Gm49577 16 57761481 to 57762158 677 - pseudogene predicted gene, 49577