Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 16:57281669-57501683

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31 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tmem30c 16 57266139 to 57292865 26726 - protein coding gene transmembrane protein 30C
Tssr141599 16 57292845 to 57292867 22 - TSS region transcription start site region 141599
Cmss1 16 57302000 to 57606864 304864 - protein coding gene cms small ribosomal subunit 1
Tssr138824 16 57331950 to 57331960 10 + TSS region transcription start site region 138824
4921517D16Rik 16 57331951 to 57335432 3481 + antisense lncRNA gene RIKEN cDNA 4921517D16 gene
Gm49579 16 57338310 to 57340403 2093 + antisense lncRNA gene predicted gene, 49579
Tssr141600 16 57350548 to 57350578 30 - TSS region transcription start site region 141600
Tssr138825 16 57352771 to 57352782 11 + TSS region transcription start site region 138825
Tssr138826 16 57352813 to 57352825 12 + TSS region transcription start site region 138826
Tssr138827 16 57352982 to 57353002 20 + TSS region transcription start site region 138827
Tssr138828 16 57353006 to 57353035 29 + TSS region transcription start site region 138828
Tssr138829 16 57353102 to 57353117 15 + TSS region transcription start site region 138829
Tssr141601 16 57353132 to 57353163 31 - TSS region transcription start site region 141601
Tssr141602 16 57353180 to 57353197 17 - TSS region transcription start site region 141602
Tssr138830 16 57353238 to 57353255 17 + TSS region transcription start site region 138830
Tssr138831 16 57353271 to 57353284 13 + TSS region transcription start site region 138831
Filip1l 16 57353277 to 57572804 219527 + protein coding gene filamin A interacting protein 1-like
Tssr138832 16 57353296 to 57353308 12 + TSS region transcription start site region 138832
Tssr141603 16 57391453 to 57391492 39 - TSS region transcription start site region 141603
Tssr138833 16 57391474 to 57391509 35 + TSS region transcription start site region 138833
Cpgi8336 16 57391484 to 57391731 247 CpG island CpG island 8336
Tssr141604 16 57391527 to 57391557 30 - TSS region transcription start site region 141604
Tssr141605 16 57391669 to 57391683 14 - TSS region transcription start site region 141605
Tssr4917 16 57397712 to 57397739 27 + TSS region transcription start site region 4917
Tssr141606 16 57421054 to 57421059 5 - TSS region transcription start site region 141606
Gm20956 16 57425402 to 57425951 549 - pseudogene predicted gene, 20956
Tssr138834 16 57443391 to 57443395 4 + TSS region transcription start site region 138834
Tssr138835 16 57449138 to 57449141 3 + TSS region transcription start site region 138835
D16Mit64 16 57459493 to 57459712 219 DNA segment DNA segment, Chr 16, Massachusetts Institute of Technology 64
Tssr138836 16 57471335 to 57471348 13 + TSS region transcription start site region 138836
Tssr138837 16 57498171 to 57498175 4 + TSS region transcription start site region 138837