Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 16:57206139-57352865

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22 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tbc1d23 16 57168862 to 57231504 62642 - protein coding gene TBC1 domain family, member 23
Tssr141592 16 57211156 to 57211167 11 - TSS region transcription start site region 141592
Cpgi8334 16 57231103 to 57231768 665 CpG island CpG island 8334
Tssr141593 16 57231350 to 57231359 9 - TSS region transcription start site region 141593
Tssr141594 16 57231364 to 57231405 41 - TSS region transcription start site region 141594
Tssr141595 16 57231434 to 57231509 75 - TSS region transcription start site region 141595
Tssr138823 16 57239697 to 57239702 5 + TSS region transcription start site region 138823
Gm49581 16 57265362 to 57265805 443 - pseudogene predicted gene, 49581
Tssr141596 16 57265482 to 57265491 9 - TSS region transcription start site region 141596
Tssr141597 16 57265501 to 57265513 12 - TSS region transcription start site region 141597
Tssr141598 16 57265522 to 57265542 20 - TSS region transcription start site region 141598
Tmem30c 16 57266139 to 57292865 26726 - protein coding gene transmembrane protein 30C
Cpgi8335 16 57280451 to 57280744 293 CpG island CpG island 8335
Gm26800 16 57280890 to 57281496 606 + antisense lncRNA gene predicted gene, 26800
Tssr141599 16 57292845 to 57292867 22 - TSS region transcription start site region 141599
Cmss1 16 57302000 to 57606864 304864 - protein coding gene cms small ribosomal subunit 1
Tssr138824 16 57331950 to 57331960 10 + TSS region transcription start site region 138824
4921517D16Rik 16 57331951 to 57335432 3481 + antisense lncRNA gene RIKEN cDNA 4921517D16 gene
Gm49579 16 57338310 to 57340403 2093 + antisense lncRNA gene predicted gene, 49579
Tssr141600 16 57350548 to 57350578 30 - TSS region transcription start site region 141600
Tssr138825 16 57352771 to 57352782 11 + TSS region transcription start site region 138825
Tssr138826 16 57352813 to 57352825 12 + TSS region transcription start site region 138826