Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 16:5720270-6050311

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19 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
D16Mit8 16 5736119 to 5736396 277 DNA segment DNA segment, Chr 16, Massachusetts Institute of Technology 8
D16Mit130 16 5800196 to 5800337 141 DNA segment DNA segment, Chr 16, Massachusetts Institute of Technology 130
Tssr136918 16 5855728 to 5855743 15 + TSS region transcription start site region 136918
Tssr136919 16 5855767 to 5855779 12 + TSS region transcription start site region 136919
Cpgi7934 16 5884702 to 5885890 1188 CpG island CpG island 7934
Tssr136920 16 5884921 to 5884962 41 + TSS region transcription start site region 136920
Tssr136921 16 5884969 to 5885048 79 + TSS region transcription start site region 136921
Tssr136922 16 5885270 to 5885311 41 + TSS region transcription start site region 136922
Rbfox1 16 5885355 to 7411526 1526171 + protein coding gene RNA binding protein, fox-1 homolog (C. elegans) 1
Tssr136923 16 5885453 to 5885509 56 + TSS region transcription start site region 136923
Tssr136924 16 5885579 to 5885592 13 + TSS region transcription start site region 136924
Tssr136925 16 5902157 to 5902201 44 + TSS region transcription start site region 136925
Tssr136926 16 5902593 to 5902595 2 + TSS region transcription start site region 136926
Gm36902 16 5946938 to 5950798 3860 - lncRNA gene predicted gene, 36902
Tssr139848 16 5949934 to 5949945 11 - TSS region transcription start site region 139848
Tssr139849 16 5949955 to 5949969 14 - TSS region transcription start site region 139849
1700123O21Rik 16 5975587 to 5998496 22909 + sense intronic lncRNA gene RIKEN cDNA 1700123O21 gene
D16Mit121 16 6001020 to 6001368 348 DNA segment DNA segment, Chr 16, Massachusetts Institute of Technology 121
Tssr136927 16 6042362 to 6042371 9 + TSS region transcription start site region 136927