Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 16:56127878-57040135

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53 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Senp7 16 56057530 to 56190031 132501 + protein coding gene SUMO1/sentrin specific peptidase 7
Gm49682 16 56149166 to 56149562 396 - pseudogene predicted gene, 49682
Tssr138808 16 56193604 to 56193614 10 + TSS region transcription start site region 138808
Tssr138809 16 56204284 to 56204289 5 + TSS region transcription start site region 138809
Impg2 16 56204313 to 56273756 69443 + protein coding gene interphotoreceptor matrix proteoglycan 2
Tssr138810 16 56204325 to 56204338 13 + TSS region transcription start site region 138810
Tssr138811 16 56282152 to 56282161 9 + TSS region transcription start site region 138811
D16Mit171 16 56294865 to 56294987 122 DNA segment DNA segment, Chr 16, Massachusetts Institute of Technology 171
D16Mit171.1 16 56294976 to 56295105 129 DNA segment DNA segment, Chr 16, Massachusetts Institute of Technology 171.1
Gm21050 16 56335586 to 56337378 1792 - pseudogene predicted gene, 21050
Tssr138812 16 56477821 to 56477835 14 + TSS region transcription start site region 138812
Tssr138813 16 56477838 to 56477860 22 + TSS region transcription start site region 138813
Tssr138814 16 56477867 to 56477891 24 + TSS region transcription start site region 138814
Abi3bp 16 56477878 to 56690135 212257 + protein coding gene ABI gene family, member 3 (NESH) binding protein
D16Ium65 16 56559583 to 56559819 236 DNA segment DNA segment, Chr 16, Indiana University Medical 65
Tfg 16 56690332 to 56717450 27118 - protein coding gene Trk-fused gene
Tssr141554 16 56690999 to 56691012 13 - TSS region transcription start site region 141554
Tssr141555 16 56712825 to 56712838 13 - TSS region transcription start site region 141555
Cpgi8330 16 56716723 to 56717865 1142 CpG island CpG island 8330
Tssr141556 16 56717227 to 56717285 58 - TSS region transcription start site region 141556
Tssr141557 16 56717286 to 56717412 126 - TSS region transcription start site region 141557
Tssr141558 16 56717446 to 56717457 11 - TSS region transcription start site region 141558
Tssr141559 16 56717528 to 56717539 11 - TSS region transcription start site region 141559
Tssr141560 16 56717541 to 56717576 35 - TSS region transcription start site region 141560
Tssr141561 16 56721261 to 56721272 11 - TSS region transcription start site region 141561
Adgrg7 16 56724609 to 56795855 71246 - protein coding gene adhesion G protein-coupled receptor G7
Gm15693 16 56758265 to 56758901 636 + pseudogene predicted gene 15693
Tssr141562 16 56795823 to 56795899 76 - TSS region transcription start site region 141562
Tmem45a 16 56805161 to 56886166 81005 - protein coding gene transmembrane protein 45a
Tssr141563 16 56831760 to 56831771 11 - TSS region transcription start site region 141563
Tssr141564 16 56831772 to 56831790 18 - TSS region transcription start site region 141564
Tssr141565 16 56831809 to 56831819 10 - TSS region transcription start site region 141565
Tssr141566 16 56831830 to 56831835 5 - TSS region transcription start site region 141566
Tssr141567 16 56831838 to 56831861 23 - TSS region transcription start site region 141567
Tssr141568 16 56831866 to 56831875 9 - TSS region transcription start site region 141568
Tssr141569 16 56831878 to 56831891 13 - TSS region transcription start site region 141569
Tssr4916 16 56839529 to 56839543 14 - TSS region transcription start site region 4916
Tssr141570 16 56839547 to 56839558 11 - TSS region transcription start site region 141570
Tssr141571 16 56867661 to 56867670 9 - TSS region transcription start site region 141571
Tssr141572 16 56885923 to 56885932 9 - TSS region transcription start site region 141572
Tssr141573 16 56885955 to 56885968 13 - TSS region transcription start site region 141573
Tssr141574 16 56885978 to 56885989 11 - TSS region transcription start site region 141574
Tssr141575 16 56886016 to 56886026 10 - TSS region transcription start site region 141575
Tssr141576 16 56886093 to 56886125 32 - TSS region transcription start site region 141576
Tssr141577 16 56886131 to 56886176 45 - TSS region transcription start site region 141577
Cpgi8331 16 56886176 to 56886401 225 CpG island CpG island 8331
Gm15839 16 56886367 to 56921506 35139 + antisense lncRNA gene predicted gene 15839
Gm15840 16 56909111 to 56910053 942 - pseudogene predicted gene 15840
Gm8932 16 56909295 to 56909926 631 + pseudogene predicted gene 8932
Lnp1 16 56914344 to 56928061 13717 - protein coding gene leukemia NUP98 fusion partner 1
Tssr141578 16 56928089 to 56928127 38 - TSS region transcription start site region 141578
Gm8938 16 56981703 to 56982837 1134 + pseudogene predicted gene 8938
Tmem45a2 16 57036967 to 57071372 34405 - protein coding gene transmembrane protein 45A2