MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 16:55985753-56085887

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Zbtb11	16	55973883 to 56008913	35030	+	protein coding gene	zinc finger and BTB domain containing 11
Tssr141548	16	55994970 to 55994984	14	-	TSS region	transcription start site region 141548
Pcnp	16	56015507 to 56030175	14668	-	protein coding gene	PEST proteolytic signal containing nuclear protein
Tssr141549	16	56017041 to 56017050	9	-	TSS region	transcription start site region 141549
Tssr141550	16	56021260 to 56021264	4	-	TSS region	transcription start site region 141550
Cpgi8326	16	56028961 to 56030156	1195		CpG island	CpG island 8326
Tssr141551	16	56029666 to 56029720	54	-	TSS region	transcription start site region 141551
Trmt10c	16	56033720 to 56037774	4054	-	protein coding gene	tRNA methyltransferase 10C, mitochondrial RNase P subunit
Gm22422	16	56035753 to 56035887	134	-	snoRNA gene	predicted gene, 22422
Cpgi8327	16	56037380 to 56038158	778		CpG island	CpG island 8327
Tssr141552	16	56037728 to 56037810	82	-	TSS region	transcription start site region 141552
Senp7	16	56057530 to 56190031	132501	+	protein coding gene	SUMO1/sentrin specific peptidase 7
Cpgi8328	16	56064101 to 56064782	681		CpG island	CpG island 8328
Gm41462	16	56067819 to 56069664	1845	-	lncRNA gene	predicted gene, 41462
Gm24047	16	56070563 to 56070666	103	+	miRNA gene	predicted gene, 24047
Cpgi8329	16	56075393 to 56076149	756		CpG island	CpG island 8329
Tssr138804	16	56075399 to 56075492	93	+	TSS region	transcription start site region 138804
Tssr138805	16	56075508 to 56075518	10	+	TSS region	transcription start site region 138805