Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 16:55055838-55947490

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77 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm5769 16 55074405 to 55074986 581 + pseudogene predicted gene 5769
Zpld1 16 55225175 to 55297986 72811 - protein coding gene zona pellucida like domain containing 1
D16Mit221 16 55231923 to 55232039 116 DNA segment DNA Segment, Chr 16, Massachusetts Institute of Technology 221
Tssr4912 16 55262155 to 55262159 4 + TSS region transcription start site region 4912
Tssr4913 16 55282923 to 55282958 35 - TSS region transcription start site region 4913
Tssr4914 16 55283235 to 55283240 5 - TSS region transcription start site region 4914
Tssr141501 16 55283281 to 55283287 6 - TSS region transcription start site region 141501
Gm45968 16 55420838 to 55582490 161652 - lncRNA gene predicted gene, 45968
Mir5118 16 55494731 to 55494797 66 + miRNA gene microRNA 5118
Tssr141502 16 55522302 to 55522311 9 - TSS region transcription start site region 141502
Tssr141503 16 55523668 to 55523679 11 - TSS region transcription start site region 141503
Tssr141504 16 55523680 to 55523701 21 - TSS region transcription start site region 141504
Tssr141505 16 55523731 to 55523746 15 - TSS region transcription start site region 141505
Tssr141506 16 55523781 to 55523784 3 - TSS region transcription start site region 141506
Tssr138787 16 55526261 to 55526266 5 + TSS region transcription start site region 138787
D16Mit127 16 55533975 to 55534078 103 DNA segment DNA segment, Chr 16, Massachusetts Institute of Technology 127
Tssr4915 16 55551216 to 55551219 3 + TSS region transcription start site region 4915
Gm23003 16 55594782 to 55594888 106 - snRNA gene predicted gene, 23003
D16Mit184 16 55603180 to 55603377 197 DNA segment DNA segment, Chr 16, Massachusetts Institute of Technology 184
Gm19771 16 55739918 to 55740152 234 + pseudogene predicted gene, 19771
Gm26369 16 55779045 to 55779144 99 - snRNA gene predicted gene, 26369
Tssr141507 16 55787943 to 55787964 21 - TSS region transcription start site region 141507
Tssr141508 16 55798937 to 55798973 36 - TSS region transcription start site region 141508
Nfkbiz 16 55811377 to 55838641 27264 - protein coding gene nuclear factor of kappa light polypeptide gene enhancer in B cells inhibitor, zeta
Tssr141509 16 55811942 to 55811958 16 - TSS region transcription start site region 141509
Tssr141510 16 55812235 to 55812248 13 - TSS region transcription start site region 141510
Tssr141511 16 55816526 to 55816540 14 - TSS region transcription start site region 141511
Tssr138788 16 55816773 to 55816793 20 + TSS region transcription start site region 138788
Tssr138789 16 55818093 to 55818128 35 + TSS region transcription start site region 138789
Tssr138790 16 55818139 to 55818190 51 + TSS region transcription start site region 138790
Tssr141512 16 55818299 to 55818337 38 - TSS region transcription start site region 141512
Tssr141513 16 55818454 to 55818475 21 - TSS region transcription start site region 141513
Tssr141514 16 55818513 to 55818537 24 - TSS region transcription start site region 141514
Tssr138791 16 55818554 to 55818558 4 + TSS region transcription start site region 138791
Tssr141515 16 55818958 to 55818960 2 - TSS region transcription start site region 141515
Tssr141516 16 55819559 to 55819570 11 - TSS region transcription start site region 141516
Tssr141517 16 55819623 to 55819637 14 - TSS region transcription start site region 141517
Tssr138792 16 55820385 to 55820414 29 + TSS region transcription start site region 138792
Cpgi8318 16 55821494 to 55822660 1166 CpG island CpG island 8318
Tssr141518 16 55821929 to 55821947 18 - TSS region transcription start site region 141518
Tssr141519 16 55822036 to 55822092 56 - TSS region transcription start site region 141519
Tssr141520 16 55822128 to 55822145 17 - TSS region transcription start site region 141520
Tssr141521 16 55822525 to 55822556 31 - TSS region transcription start site region 141521
Tssr141522 16 55828453 to 55828460 7 - TSS region transcription start site region 141522
Tssr141523 16 55831136 to 55831166 30 - TSS region transcription start site region 141523
Tssr141524 16 55831224 to 55831244 20 - TSS region transcription start site region 141524
Tssr141525 16 55831263 to 55831287 24 - TSS region transcription start site region 141525
Tssr141526 16 55831289 to 55831294 5 - TSS region transcription start site region 141526
Tssr141527 16 55831320 to 55831331 11 - TSS region transcription start site region 141527
Tssr141528 16 55831485 to 55831497 12 - TSS region transcription start site region 141528
Tssr141529 16 55838591 to 55838600 9 - TSS region transcription start site region 141529
Cpgi8319 16 55838612 to 55838983 371 CpG island CpG island 8319
Tssr141530 16 55838630 to 55838641 11 - TSS region transcription start site region 141530
Tssr141531 16 55838644 to 55838661 17 - TSS region transcription start site region 141531
Tssr141532 16 55838666 to 55838675 9 - TSS region transcription start site region 141532
Tssr141533 16 55838780 to 55838789 9 - TSS region transcription start site region 141533
Tssr141534 16 55838827 to 55838853 26 - TSS region transcription start site region 141534
Nxpe3 16 55839953 to 55895285 55332 - protein coding gene neurexophilin and PC-esterase domain family, member 3
Tssr141535 16 55847806 to 55847817 11 - TSS region transcription start site region 141535
Cpgi8320 16 55849287 to 55849491 204 CpG island CpG island 8320
Tssr141536 16 55865566 to 55865570 4 - TSS region transcription start site region 141536
Gm19041 16 55870304 to 55870824 520 + pseudogene predicted gene, 19041
Gm17809 16 55883072 to 55884491 1419 - pseudogene predicted gene, 17809
Cpgi8321 16 55894699 to 55895744 1045 CpG island CpG island 8321
Tssr141537 16 55895184 to 55895214 30 - TSS region transcription start site region 141537
Tssr141538 16 55895324 to 55895338 14 - TSS region transcription start site region 141538
Tssr141539 16 55895355 to 55895410 55 - TSS region transcription start site region 141539
Cep97 16 55899888 to 55934848 34960 - protein coding gene centrosomal protein 97
Cpgi8322 16 55905275 to 55905842 567 CpG island CpG island 8322
Tssr141540 16 55916843 to 55916851 8 - TSS region transcription start site region 141540
Tssr141541 16 55923863 to 55923881 18 - TSS region transcription start site region 141541
Tssr141542 16 55923986 to 55923992 6 - TSS region transcription start site region 141542
Cpgi8323 16 55933835 to 55934919 1084 CpG island CpG island 8323
Tssr141543 16 55934808 to 55934840 32 - TSS region transcription start site region 141543
Tssr141544 16 55934845 to 55934868 23 - TSS region transcription start site region 141544
Gm8900 16 55940339 to 55940711 372 - pseudogene predicted gene 8900
Tssr141545 16 55940732 to 55940735 3 - TSS region transcription start site region 141545