MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 16:53888428-55368552

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
D16Mit30	16	53962550 to 53962701	151		DNA segment	DNA segment, Chr 16, Massachusetts Institute of Technology 30
Gm5487	16	53983928 to 53986084	2156	+	pseudogene	predicted gene 5487
Tssr4911	16	54166296 to 54166298	2	-	TSS region	transcription start site region 4911
Gm49639	16	54350124 to 54350328	204	-	pseudogene	predicted gene, 49639
Gm25853	16	54354462 to 54354593	131	+	snoRNA gene	predicted gene, 25853
Gm46541	16	54582791 to 54583197	406	-	pseudogene	predicted gene, 46541
Gm23180	16	54628428 to 54628552	124	+	snoRNA gene	predicted gene, 23180
D16Mit46	16	54685934 to 54686174	240		DNA segment	DNA segment, Chr 16, Massachusetts Institute of Technology 46
Gm8881	16	54826498 to 54827894	1396	-	pseudogene	predicted gene 8881
D16Mit199	16	54915710 to 54915817	107		DNA segment	DNA Segment, Chr 16, Massachusetts Institute of Technology 199
Gm22977	16	54972431 to 54972537	106	+	snRNA gene	predicted gene, 22977
Gm5769	16	55074405 to 55074986	581	+	pseudogene	predicted gene 5769
Zpld1	16	55225175 to 55297986	72811	-	protein coding gene	zona pellucida like domain containing 1
D16Mit221	16	55231923 to 55232039	116		DNA segment	DNA Segment, Chr 16, Massachusetts Institute of Technology 221
Tssr4912	16	55262155 to 55262159	4	+	TSS region	transcription start site region 4912
Tssr4913	16	55282923 to 55282958	35	-	TSS region	transcription start site region 4913
Tssr4914	16	55283235 to 55283240	5	-	TSS region	transcription start site region 4914
Tssr141501	16	55283281 to 55283287	6	-	TSS region	transcription start site region 141501