Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 16:52449282-54509684

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32 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Alcam 16 52248996 to 52453064 204068 - protein coding gene activated leukocyte cell adhesion molecule
Cpgi8316 16 52450414 to 52450726 312 CpG island CpG island 8316
Tssr141491 16 52451875 to 52451887 12 - TSS region transcription start site region 141491
Cpgi8317 16 52452246 to 52453669 1423 CpG island CpG island 8317
Tssr141492 16 52452613 to 52452677 64 - TSS region transcription start site region 141492
Tssr141493 16 52452958 to 52452983 25 - TSS region transcription start site region 141493
Tssr141494 16 52452989 to 52453013 24 - TSS region transcription start site region 141494
Tssr141495 16 52453017 to 52453028 11 - TSS region transcription start site region 141495
Tssr141496 16 52453161 to 52453188 27 - TSS region transcription start site region 141496
Tssr138782 16 52453338 to 52453415 77 + TSS region transcription start site region 138782
Tssr141497 16 52468527 to 52468557 30 - TSS region transcription start site region 141497
Tssr4910 16 52468560 to 52468565 5 - TSS region transcription start site region 4910
Tssr138783 16 52468679 to 52468688 9 + TSS region transcription start site region 138783
Tssr141498 16 52468757 to 52468774 17 - TSS region transcription start site region 141498
Gm49634 16 52581172 to 52581408 236 - pseudogene predicted gene, 49634
Tssr138784 16 52746469 to 52746473 4 + TSS region transcription start site region 138784
4930404A05Rik 16 52799508 to 52815744 16236 - lincRNA gene RIKEN cDNA 4930404A05 gene
Tssr141499 16 52815758 to 52815767 9 - TSS region transcription start site region 141499
4930405D01Rik 16 52828813 to 52953947 125134 + lincRNA gene RIKEN cDNA 4930405D01 gene
Tssr138785 16 52829129 to 52829138 9 + TSS region transcription start site region 138785
Gm25723 16 52946804 to 52946929 125 - snoRNA gene predicted gene, 25723
Tssr141500 16 53246522 to 53246548 26 - TSS region transcription start site region 141500
Gm22459 16 53404086 to 53404193 107 - snoRNA gene predicted gene, 22459
Gm49637 16 53479282 to 53479684 402 - pseudogene predicted gene, 49637
Tssr138786 16 53576459 to 53576466 7 + TSS region transcription start site region 138786
Gm49638 16 53619529 to 53620067 538 - pseudogene predicted gene, 49638
Gm25041 16 53885370 to 53885434 64 + miRNA gene predicted gene, 25041
D16Mit30 16 53962550 to 53962701 151 DNA segment DNA segment, Chr 16, Massachusetts Institute of Technology 30
Gm5487 16 53983928 to 53986084 2156 + pseudogene predicted gene 5487
Tssr4911 16 54166296 to 54166298 2 - TSS region transcription start site region 4911
Gm49639 16 54350124 to 54350328 204 - pseudogene predicted gene, 49639
Gm25853 16 54354462 to 54354593 131 + snoRNA gene predicted gene, 25853