Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 16:52404282-54554684

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72 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Alcam 16 52248996 to 52453064 204068 - protein coding gene activated leukocyte cell adhesion molecule
Tssr141454 16 52404435 to 52404438 3 - TSS region transcription start site region 141454
Tssr141455 16 52406724 to 52406736 12 - TSS region transcription start site region 141455
Tssr141456 16 52407596 to 52407609 13 - TSS region transcription start site region 141456
Tssr141457 16 52407623 to 52407669 46 - TSS region transcription start site region 141457
Tssr141458 16 52407677 to 52407698 21 - TSS region transcription start site region 141458
Tssr141459 16 52407700 to 52407711 11 - TSS region transcription start site region 141459
Tssr141460 16 52407734 to 52407754 20 - TSS region transcription start site region 141460
Tssr141461 16 52407758 to 52407769 11 - TSS region transcription start site region 141461
Tssr141462 16 52407812 to 52407820 8 - TSS region transcription start site region 141462
Tssr141463 16 52411572 to 52411583 11 - TSS region transcription start site region 141463
Tssr141464 16 52411678 to 52411690 12 - TSS region transcription start site region 141464
Tssr141465 16 52411716 to 52411754 38 - TSS region transcription start site region 141465
Tssr141466 16 52411760 to 52411778 18 - TSS region transcription start site region 141466
Tssr138780 16 52413923 to 52413933 10 + TSS region transcription start site region 138780
6720473M08Rik 16 52414282 to 52422210 7928 unclassified gene RIKEN cDNA 6720473M08 gene
Tssr141467 16 52417623 to 52417638 15 - TSS region transcription start site region 141467
Tssr141468 16 52418439 to 52418478 39 - TSS region transcription start site region 141468
Tssr141469 16 52419910 to 52419919 9 - TSS region transcription start site region 141469
Tssr141470 16 52419951 to 52419963 12 - TSS region transcription start site region 141470
Tssr141471 16 52419997 to 52420015 18 - TSS region transcription start site region 141471
Tssr141472 16 52420019 to 52420030 11 - TSS region transcription start site region 141472
Tssr141473 16 52420046 to 52420072 26 - TSS region transcription start site region 141473
Tssr141474 16 52420124 to 52420135 11 - TSS region transcription start site region 141474
Tssr141475 16 52420260 to 52420275 15 - TSS region transcription start site region 141475
Tssr141476 16 52424351 to 52424392 41 - TSS region transcription start site region 141476
Tssr141477 16 52424436 to 52424454 18 - TSS region transcription start site region 141477
Tssr141478 16 52424577 to 52424581 4 - TSS region transcription start site region 141478
Tssr141479 16 52424704 to 52424720 16 - TSS region transcription start site region 141479
Tssr141480 16 52424917 to 52424940 23 - TSS region transcription start site region 141480
Tssr138781 16 52426162 to 52426180 18 + TSS region transcription start site region 138781
Tssr141481 16 52427002 to 52427009 7 - TSS region transcription start site region 141481
Tssr141482 16 52427518 to 52427538 20 - TSS region transcription start site region 141482
Tssr141483 16 52427802 to 52427841 39 - TSS region transcription start site region 141483
Tssr141484 16 52429489 to 52429498 9 - TSS region transcription start site region 141484
Tssr141485 16 52434495 to 52434507 12 - TSS region transcription start site region 141485
Tssr141486 16 52436269 to 52436285 16 - TSS region transcription start site region 141486
Tssr141487 16 52436497 to 52436515 18 - TSS region transcription start site region 141487
Tssr141488 16 52438329 to 52438330 1 - TSS region transcription start site region 141488
Tssr141489 16 52442291 to 52442299 8 - TSS region transcription start site region 141489
Tssr141490 16 52442364 to 52442375 11 - TSS region transcription start site region 141490
Cpgi8316 16 52450414 to 52450726 312 CpG island CpG island 8316
Tssr141491 16 52451875 to 52451887 12 - TSS region transcription start site region 141491
Cpgi8317 16 52452246 to 52453669 1423 CpG island CpG island 8317
Tssr141492 16 52452613 to 52452677 64 - TSS region transcription start site region 141492
Tssr141493 16 52452958 to 52452983 25 - TSS region transcription start site region 141493
Tssr141494 16 52452989 to 52453013 24 - TSS region transcription start site region 141494
Tssr141495 16 52453017 to 52453028 11 - TSS region transcription start site region 141495
Tssr141496 16 52453161 to 52453188 27 - TSS region transcription start site region 141496
Tssr138782 16 52453338 to 52453415 77 + TSS region transcription start site region 138782
Tssr141497 16 52468527 to 52468557 30 - TSS region transcription start site region 141497
Tssr4910 16 52468560 to 52468565 5 - TSS region transcription start site region 4910
Tssr138783 16 52468679 to 52468688 9 + TSS region transcription start site region 138783
Tssr141498 16 52468757 to 52468774 17 - TSS region transcription start site region 141498
Gm49634 16 52581172 to 52581408 236 - pseudogene predicted gene, 49634
Tssr138784 16 52746469 to 52746473 4 + TSS region transcription start site region 138784
4930404A05Rik 16 52799508 to 52815744 16236 - lincRNA gene RIKEN cDNA 4930404A05 gene
Tssr141499 16 52815758 to 52815767 9 - TSS region transcription start site region 141499
4930405D01Rik 16 52828813 to 52953947 125134 + lincRNA gene RIKEN cDNA 4930405D01 gene
Tssr138785 16 52829129 to 52829138 9 + TSS region transcription start site region 138785
Gm25723 16 52946804 to 52946929 125 - snoRNA gene predicted gene, 25723
Tssr141500 16 53246522 to 53246548 26 - TSS region transcription start site region 141500
Gm22459 16 53404086 to 53404193 107 - snoRNA gene predicted gene, 22459
Gm49637 16 53479282 to 53479684 402 - pseudogene predicted gene, 49637
Tssr138786 16 53576459 to 53576466 7 + TSS region transcription start site region 138786
Gm49638 16 53619529 to 53620067 538 - pseudogene predicted gene, 49638
Gm25041 16 53885370 to 53885434 64 + miRNA gene predicted gene, 25041
D16Mit30 16 53962550 to 53962701 151 DNA segment DNA segment, Chr 16, Massachusetts Institute of Technology 30
Gm5487 16 53983928 to 53986084 2156 + pseudogene predicted gene 5487
Tssr4911 16 54166296 to 54166298 2 - TSS region transcription start site region 4911
Gm49639 16 54350124 to 54350328 204 - pseudogene predicted gene, 49639
Gm25853 16 54354462 to 54354593 131 + snoRNA gene predicted gene, 25853