Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 16:5233591-5713768

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33 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi7930 16 5233504 to 5234151 647 CpG island CpG island 7930
Tssr136907 16 5233615 to 5233653 38 + TSS region transcription start site region 136907
Alg1 16 5233621 to 5244909 11288 + protein coding gene asparagine-linked glycosylation 1 (beta-1,4-mannosyltransferase)
Eef2kmt 16 5244155 to 5255956 11801 - protein coding gene eukaryotic elongation factor 2 lysine methyltransferase
Gm15983 16 5254786 to 5289621 34835 + antisense lncRNA gene predicted gene 15983
Cpgi7931 16 5255411 to 5256591 1180 CpG island CpG island 7931
Tssr139843 16 5255923 to 5255965 42 - TSS region transcription start site region 139843
Tssr4782 16 5305323 to 5305327 4 + TSS region transcription start site region 4782
Cpgi7932 16 5306728 to 5307307 579 CpG island CpG island 7932
Gm41414 16 5306801 to 5450664 143863 + lincRNA gene predicted gene, 41414
Tssr136908 16 5306827 to 5306865 38 + TSS region transcription start site region 136908
n-R5s30 16 5324036 to 5324157 121 - rRNA gene nuclear encoded rRNA 5S 30
Tssr139844 16 5367859 to 5367868 9 - TSS region transcription start site region 139844
Tssr139845 16 5371254 to 5371264 10 - TSS region transcription start site region 139845
Tssr136909 16 5375082 to 5375095 13 + TSS region transcription start site region 136909
Tssr136910 16 5375097 to 5375106 9 + TSS region transcription start site region 136910
Tssr136911 16 5378142 to 5378153 11 + TSS region transcription start site region 136911
Tssr136912 16 5378155 to 5378170 15 + TSS region transcription start site region 136912
Tssr136913 16 5382381 to 5382388 7 + TSS region transcription start site region 136913
Tssr136914 16 5393694 to 5393708 14 + TSS region transcription start site region 136914
Tssr136915 16 5431388 to 5431417 29 + TSS region transcription start site region 136915
Tssr136916 16 5431475 to 5431486 11 + TSS region transcription start site region 136916
Tssr139846 16 5431773 to 5431813 40 - TSS region transcription start site region 139846
Tssr139847 16 5445867 to 5445877 10 - TSS region transcription start site region 139847
Cpgi7933 16 5473591 to 5473768 177 CpG island CpG island 7933
Tssr136917 16 5476342 to 5476346 4 + TSS region transcription start site region 136917
Gm41416 16 5483865 to 5484954 1089 + lncRNA gene predicted gene, 41416
Tssr4783 16 5608213 to 5608214 1 + TSS region transcription start site region 4783
D16Mit182 16 5682496 to 5682710 214 DNA segment DNA segment, Chr 16, Massachusetts Institute of Technology 182
Loca2 16 5682496 to 5682710 214 QTL locomotor activity 2
D16Mit107 16 5702256 to 5702454 198 DNA segment DNA segment, Chr 16, Massachusetts Institute of Technology 107
Adip25 16 5702256 to 5702454 198 QTL adiposity 25
D16Mit154 16 5706546 to 5706689 143 DNA segment DNA segment, Chr 16, Massachusetts Institute of Technology 154