Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 16:5210097-5540106

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33 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
AU021092 16 5211823 to 5222299 10476 - protein coding gene expressed sequence AU021092
Mir6364 16 5215789 to 5215874 85 - miRNA gene microRNA 6364
Tssr139841 16 5222257 to 5222299 42 - TSS region transcription start site region 139841
Gm23689 16 5223364 to 5223473 109 + miRNA gene predicted gene, 23689
Tssr139842 16 5227825 to 5227830 5 - TSS region transcription start site region 139842
Gm26095 16 5227920 to 5228029 109 + miRNA gene predicted gene, 26095
Cpgi7930 16 5233504 to 5234151 647 CpG island CpG island 7930
Tssr136907 16 5233615 to 5233653 38 + TSS region transcription start site region 136907
Alg1 16 5233621 to 5244909 11288 + protein coding gene asparagine-linked glycosylation 1 (beta-1,4-mannosyltransferase)
Eef2kmt 16 5244155 to 5255956 11801 - protein coding gene eukaryotic elongation factor 2 lysine methyltransferase
Gm15983 16 5254786 to 5289621 34835 + antisense lncRNA gene predicted gene 15983
Cpgi7931 16 5255411 to 5256591 1180 CpG island CpG island 7931
Tssr139843 16 5255923 to 5255965 42 - TSS region transcription start site region 139843
Tssr4782 16 5305323 to 5305327 4 + TSS region transcription start site region 4782
Cpgi7932 16 5306728 to 5307307 579 CpG island CpG island 7932
Gm41414 16 5306801 to 5450664 143863 + lincRNA gene predicted gene, 41414
Tssr136908 16 5306827 to 5306865 38 + TSS region transcription start site region 136908
n-R5s30 16 5324036 to 5324157 121 - rRNA gene nuclear encoded rRNA 5S 30
Tssr139844 16 5367859 to 5367868 9 - TSS region transcription start site region 139844
Tssr139845 16 5371254 to 5371264 10 - TSS region transcription start site region 139845
Tssr136909 16 5375082 to 5375095 13 + TSS region transcription start site region 136909
Tssr136910 16 5375097 to 5375106 9 + TSS region transcription start site region 136910
Tssr136911 16 5378142 to 5378153 11 + TSS region transcription start site region 136911
Tssr136912 16 5378155 to 5378170 15 + TSS region transcription start site region 136912
Tssr136913 16 5382381 to 5382388 7 + TSS region transcription start site region 136913
Tssr136914 16 5393694 to 5393708 14 + TSS region transcription start site region 136914
Tssr136915 16 5431388 to 5431417 29 + TSS region transcription start site region 136915
Tssr136916 16 5431475 to 5431486 11 + TSS region transcription start site region 136916
Tssr139846 16 5431773 to 5431813 40 - TSS region transcription start site region 139846
Tssr139847 16 5445867 to 5445877 10 - TSS region transcription start site region 139847
Cpgi7933 16 5473591 to 5473768 177 CpG island CpG island 7933
Tssr136917 16 5476342 to 5476346 4 + TSS region transcription start site region 136917
Gm41416 16 5483865 to 5484954 1089 + lncRNA gene predicted gene, 41416