Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 16:51559508-54055744

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154 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr141394 16 51686759 to 51686767 8 - TSS region transcription start site region 141394
Tssr141395 16 51736241 to 51736245 4 - TSS region transcription start site region 141395
Tssr141396 16 51930006 to 51930023 17 - TSS region transcription start site region 141396
Gm29686 16 51981033 to 51987287 6254 - lncRNA gene predicted gene, 29686
Cpgi8314 16 52031157 to 52032353 1196 CpG island CpG island 8314
Cblb 16 52031230 to 52208047 176817 + protein coding gene Casitas B-lineage lymphoma b
Tssr138763 16 52031324 to 52031342 18 + TSS region transcription start site region 138763
Tssr138764 16 52031555 to 52031570 15 + TSS region transcription start site region 138764
Tssr138765 16 52031585 to 52031646 61 + TSS region transcription start site region 138765
Tssr138766 16 52032071 to 52032126 55 + TSS region transcription start site region 138766
Tssr138767 16 52032557 to 52032572 15 + TSS region transcription start site region 138767
Tssr138768 16 52033931 to 52033937 6 + TSS region transcription start site region 138768
Tssr138769 16 52049651 to 52049662 11 + TSS region transcription start site region 138769
Tssr138770 16 52049681 to 52049689 8 + TSS region transcription start site region 138770
Tssr138771 16 52060539 to 52060548 9 + TSS region transcription start site region 138771
Tssr138772 16 52074325 to 52074349 24 + TSS region transcription start site region 138772
Tssr138773 16 52074424 to 52074441 17 + TSS region transcription start site region 138773
Gm23513 16 52105015 to 52105147 132 - snoRNA gene predicted gene, 23513
Tssr138774 16 52129734 to 52129743 9 + TSS region transcription start site region 138774
Tssr141397 16 52142954 to 52142963 9 - TSS region transcription start site region 141397
Tssr138775 16 52144086 to 52144087 1 + TSS region transcription start site region 138775
Tssr138776 16 52146584 to 52146589 5 + TSS region transcription start site region 138776
Tssr141398 16 52147391 to 52147402 11 - TSS region transcription start site region 141398
Tssr141399 16 52147498 to 52147514 16 - TSS region transcription start site region 141399
Tssr138777 16 52147672 to 52147677 5 + TSS region transcription start site region 138777
Tssr138778 16 52176083 to 52176086 3 + TSS region transcription start site region 138778
Cpgi8315 16 52198260 to 52198696 436 CpG island CpG island 8315
Tssr138779 16 52206799 to 52206837 38 + TSS region transcription start site region 138779
Alcam 16 52248996 to 52453064 204068 - protein coding gene activated leukocyte cell adhesion molecule
Tssr141400 16 52249565 to 52249578 13 - TSS region transcription start site region 141400
Tssr141401 16 52249700 to 52249756 56 - TSS region transcription start site region 141401
Tssr141402 16 52249874 to 52249890 16 - TSS region transcription start site region 141402
Tssr141403 16 52250135 to 52250152 17 - TSS region transcription start site region 141403
Tssr141404 16 52250350 to 52250376 26 - TSS region transcription start site region 141404
Tssr141405 16 52258465 to 52258471 6 - TSS region transcription start site region 141405
Tssr141406 16 52268411 to 52268460 49 - TSS region transcription start site region 141406
Tssr141407 16 52270710 to 52270724 14 - TSS region transcription start site region 141407
Tssr141408 16 52270764 to 52270778 14 - TSS region transcription start site region 141408
D330040H18Rik 16 52271223 to 52273032 1809 unclassified gene RIKEN cDNA D330040H18 gene
Tssr141409 16 52271266 to 52271280 14 - TSS region transcription start site region 141409
Tssr141410 16 52271330 to 52271363 33 - TSS region transcription start site region 141410
Tssr141411 16 52271487 to 52271507 20 - TSS region transcription start site region 141411
Tssr141412 16 52271518 to 52271530 12 - TSS region transcription start site region 141412
Tssr141413 16 52271759 to 52271770 11 - TSS region transcription start site region 141413
Tssr141414 16 52272053 to 52272081 28 - TSS region transcription start site region 141414
Tssr141415 16 52272191 to 52272210 19 - TSS region transcription start site region 141415
Tssr141416 16 52273437 to 52273451 14 - TSS region transcription start site region 141416
Tssr141417 16 52273959 to 52273977 18 - TSS region transcription start site region 141417
Tssr141418 16 52274168 to 52274176 8 - TSS region transcription start site region 141418
Tssr141419 16 52278340 to 52278342 2 - TSS region transcription start site region 141419
Tssr141420 16 52287683 to 52287705 22 - TSS region transcription start site region 141420
Tssr141421 16 52298761 to 52298772 11 - TSS region transcription start site region 141421
Tssr141422 16 52301358 to 52301384 26 - TSS region transcription start site region 141422
Tssr141423 16 52301406 to 52301420 14 - TSS region transcription start site region 141423
Tssr141424 16 52301755 to 52301767 12 - TSS region transcription start site region 141424
Tssr141425 16 52304106 to 52304125 19 - TSS region transcription start site region 141425
Gm32597 16 52330962 to 52337822 6860 + lncRNA gene predicted gene, 32597
Tssr141426 16 52332447 to 52332463 16 - TSS region transcription start site region 141426
Tssr141427 16 52333152 to 52333159 7 - TSS region transcription start site region 141427
Tssr141428 16 52338507 to 52338542 35 - TSS region transcription start site region 141428
Tssr141429 16 52343793 to 52343820 27 - TSS region transcription start site region 141429
Tssr141430 16 52346737 to 52346760 23 - TSS region transcription start site region 141430
Tssr141431 16 52346929 to 52346944 15 - TSS region transcription start site region 141431
Tssr141432 16 52354272 to 52354287 15 - TSS region transcription start site region 141432
Tssr141433 16 52355886 to 52355925 39 - TSS region transcription start site region 141433
Tssr141434 16 52356070 to 52356114 44 - TSS region transcription start site region 141434
Tssr141435 16 52356137 to 52356186 49 - TSS region transcription start site region 141435
Gm41461 16 52358212 to 52365015 6803 - lncRNA gene predicted gene, 41461
Tssr141436 16 52361886 to 52361888 2 - TSS region transcription start site region 141436
Tssr141437 16 52366446 to 52366455 9 - TSS region transcription start site region 141437
Tssr141438 16 52366874 to 52366881 7 - TSS region transcription start site region 141438
Tssr141439 16 52372697 to 52372702 5 - TSS region transcription start site region 141439
Tssr141440 16 52376427 to 52376438 11 - TSS region transcription start site region 141440
Tssr141441 16 52386804 to 52386815 11 - TSS region transcription start site region 141441
Tssr141442 16 52388856 to 52388867 11 - TSS region transcription start site region 141442
Tssr141443 16 52389471 to 52389491 20 - TSS region transcription start site region 141443
Tssr141444 16 52390388 to 52390408 20 - TSS region transcription start site region 141444
Tssr141445 16 52394784 to 52394824 40 - TSS region transcription start site region 141445
Tssr141446 16 52396274 to 52396295 21 - TSS region transcription start site region 141446
Tssr141447 16 52400393 to 52400406 13 - TSS region transcription start site region 141447
Tssr141448 16 52400464 to 52400475 11 - TSS region transcription start site region 141448
Tssr141449 16 52400532 to 52400570 38 - TSS region transcription start site region 141449
Tssr141450 16 52400590 to 52400613 23 - TSS region transcription start site region 141450
Tssr141451 16 52400633 to 52400650 17 - TSS region transcription start site region 141451
Tssr141452 16 52402489 to 52402492 3 - TSS region transcription start site region 141452
Tssr141453 16 52403302 to 52403318 16 - TSS region transcription start site region 141453
Tssr141454 16 52404435 to 52404438 3 - TSS region transcription start site region 141454
Tssr141455 16 52406724 to 52406736 12 - TSS region transcription start site region 141455
Tssr141456 16 52407596 to 52407609 13 - TSS region transcription start site region 141456
Tssr141457 16 52407623 to 52407669 46 - TSS region transcription start site region 141457
Tssr141458 16 52407677 to 52407698 21 - TSS region transcription start site region 141458
Tssr141459 16 52407700 to 52407711 11 - TSS region transcription start site region 141459
Tssr141460 16 52407734 to 52407754 20 - TSS region transcription start site region 141460
Tssr141461 16 52407758 to 52407769 11 - TSS region transcription start site region 141461
Tssr141462 16 52407812 to 52407820 8 - TSS region transcription start site region 141462
Tssr141463 16 52411572 to 52411583 11 - TSS region transcription start site region 141463
Tssr141464 16 52411678 to 52411690 12 - TSS region transcription start site region 141464
Tssr141465 16 52411716 to 52411754 38 - TSS region transcription start site region 141465
Tssr141466 16 52411760 to 52411778 18 - TSS region transcription start site region 141466
Tssr138780 16 52413923 to 52413933 10 + TSS region transcription start site region 138780
6720473M08Rik 16 52414282 to 52422210 7928 unclassified gene RIKEN cDNA 6720473M08 gene
Tssr141467 16 52417623 to 52417638 15 - TSS region transcription start site region 141467
Tssr141468 16 52418439 to 52418478 39 - TSS region transcription start site region 141468
Tssr141469 16 52419910 to 52419919 9 - TSS region transcription start site region 141469
Tssr141470 16 52419951 to 52419963 12 - TSS region transcription start site region 141470
Tssr141471 16 52419997 to 52420015 18 - TSS region transcription start site region 141471
Tssr141472 16 52420019 to 52420030 11 - TSS region transcription start site region 141472
Tssr141473 16 52420046 to 52420072 26 - TSS region transcription start site region 141473
Tssr141474 16 52420124 to 52420135 11 - TSS region transcription start site region 141474
Tssr141475 16 52420260 to 52420275 15 - TSS region transcription start site region 141475
Tssr141476 16 52424351 to 52424392 41 - TSS region transcription start site region 141476
Tssr141477 16 52424436 to 52424454 18 - TSS region transcription start site region 141477
Tssr141478 16 52424577 to 52424581 4 - TSS region transcription start site region 141478
Tssr141479 16 52424704 to 52424720 16 - TSS region transcription start site region 141479
Tssr141480 16 52424917 to 52424940 23 - TSS region transcription start site region 141480
Tssr138781 16 52426162 to 52426180 18 + TSS region transcription start site region 138781
Tssr141481 16 52427002 to 52427009 7 - TSS region transcription start site region 141481
Tssr141482 16 52427518 to 52427538 20 - TSS region transcription start site region 141482
Tssr141483 16 52427802 to 52427841 39 - TSS region transcription start site region 141483
Tssr141484 16 52429489 to 52429498 9 - TSS region transcription start site region 141484
Tssr141485 16 52434495 to 52434507 12 - TSS region transcription start site region 141485
Tssr141486 16 52436269 to 52436285 16 - TSS region transcription start site region 141486
Tssr141487 16 52436497 to 52436515 18 - TSS region transcription start site region 141487
Tssr141488 16 52438329 to 52438330 1 - TSS region transcription start site region 141488
Tssr141489 16 52442291 to 52442299 8 - TSS region transcription start site region 141489
Tssr141490 16 52442364 to 52442375 11 - TSS region transcription start site region 141490
Cpgi8316 16 52450414 to 52450726 312 CpG island CpG island 8316
Tssr141491 16 52451875 to 52451887 12 - TSS region transcription start site region 141491
Cpgi8317 16 52452246 to 52453669 1423 CpG island CpG island 8317
Tssr141492 16 52452613 to 52452677 64 - TSS region transcription start site region 141492
Tssr141493 16 52452958 to 52452983 25 - TSS region transcription start site region 141493
Tssr141494 16 52452989 to 52453013 24 - TSS region transcription start site region 141494
Tssr141495 16 52453017 to 52453028 11 - TSS region transcription start site region 141495
Tssr141496 16 52453161 to 52453188 27 - TSS region transcription start site region 141496
Tssr138782 16 52453338 to 52453415 77 + TSS region transcription start site region 138782
Tssr141497 16 52468527 to 52468557 30 - TSS region transcription start site region 141497
Tssr4910 16 52468560 to 52468565 5 - TSS region transcription start site region 4910
Tssr138783 16 52468679 to 52468688 9 + TSS region transcription start site region 138783
Tssr141498 16 52468757 to 52468774 17 - TSS region transcription start site region 141498
Gm49634 16 52581172 to 52581408 236 - pseudogene predicted gene, 49634
Tssr138784 16 52746469 to 52746473 4 + TSS region transcription start site region 138784
4930404A05Rik 16 52799508 to 52815744 16236 - lincRNA gene RIKEN cDNA 4930404A05 gene
Tssr141499 16 52815758 to 52815767 9 - TSS region transcription start site region 141499
4930405D01Rik 16 52828813 to 52953947 125134 + lincRNA gene RIKEN cDNA 4930405D01 gene
Tssr138785 16 52829129 to 52829138 9 + TSS region transcription start site region 138785
Gm25723 16 52946804 to 52946929 125 - snoRNA gene predicted gene, 25723
Tssr141500 16 53246522 to 53246548 26 - TSS region transcription start site region 141500
Gm22459 16 53404086 to 53404193 107 - snoRNA gene predicted gene, 22459
Gm49637 16 53479282 to 53479684 402 - pseudogene predicted gene, 49637
Tssr138786 16 53576459 to 53576466 7 + TSS region transcription start site region 138786
Gm49638 16 53619529 to 53620067 538 - pseudogene predicted gene, 49638
Gm25041 16 53885370 to 53885434 64 + miRNA gene predicted gene, 25041
D16Mit30 16 53962550 to 53962701 151 DNA segment DNA segment, Chr 16, Massachusetts Institute of Technology 30
Gm5487 16 53983928 to 53986084 2156 + pseudogene predicted gene 5487