Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

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Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 16:51179282-55779684

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193 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Loh2 16 21827564 to 51386028 29558464 heritable phenotypic marker loss of heterozygosity, region 2
D16Mit168 16 51298497 to 51298646 149 DNA segment DNA segment, Chr 16, Massachusetts Institute of Technology 168
D16Mit157 16 51315305 to 51315435 130 DNA segment DNA segment, Chr 16, Massachusetts Institute of Technology 157
Gm6767 16 51362452 to 51363832 1380 - pseudogene predicted gene 6767
Tssr141393 16 51363889 to 51363901 12 - TSS region transcription start site region 141393
D16Mit14 16 51385838 to 51386028 190 DNA segment DNA segment, Chr 16, Massachusetts Institute of Technology 14
Gm49608 16 51416634 to 51416948 314 - pseudogene predicted gene, 49608
Milac7 16 51442133 to 51442133 0 QTL methamphetamine induced locomotor activation 7
D16Mit113 16 51455690 to 51455825 135 DNA segment DNA segment, Chr 16, Massachusetts Institute of Technology 113
Tssr141394 16 51686759 to 51686767 8 - TSS region transcription start site region 141394
Tssr141395 16 51736241 to 51736245 4 - TSS region transcription start site region 141395
Tssr141396 16 51930006 to 51930023 17 - TSS region transcription start site region 141396
Gm29686 16 51981033 to 51987287 6254 - lncRNA gene predicted gene, 29686
Cpgi8314 16 52031157 to 52032353 1196 CpG island CpG island 8314
Cblb 16 52031230 to 52208047 176817 + protein coding gene Casitas B-lineage lymphoma b
Tssr138763 16 52031324 to 52031342 18 + TSS region transcription start site region 138763
Tssr138764 16 52031555 to 52031570 15 + TSS region transcription start site region 138764
Tssr138765 16 52031585 to 52031646 61 + TSS region transcription start site region 138765
Tssr138766 16 52032071 to 52032126 55 + TSS region transcription start site region 138766
Tssr138767 16 52032557 to 52032572 15 + TSS region transcription start site region 138767
Tssr138768 16 52033931 to 52033937 6 + TSS region transcription start site region 138768
Tssr138769 16 52049651 to 52049662 11 + TSS region transcription start site region 138769
Tssr138770 16 52049681 to 52049689 8 + TSS region transcription start site region 138770
Tssr138771 16 52060539 to 52060548 9 + TSS region transcription start site region 138771
Tssr138772 16 52074325 to 52074349 24 + TSS region transcription start site region 138772
Tssr138773 16 52074424 to 52074441 17 + TSS region transcription start site region 138773
Gm23513 16 52105015 to 52105147 132 - snoRNA gene predicted gene, 23513
Tssr138774 16 52129734 to 52129743 9 + TSS region transcription start site region 138774
Tssr141397 16 52142954 to 52142963 9 - TSS region transcription start site region 141397
Tssr138775 16 52144086 to 52144087 1 + TSS region transcription start site region 138775
Tssr138776 16 52146584 to 52146589 5 + TSS region transcription start site region 138776
Tssr141398 16 52147391 to 52147402 11 - TSS region transcription start site region 141398
Tssr141399 16 52147498 to 52147514 16 - TSS region transcription start site region 141399
Tssr138777 16 52147672 to 52147677 5 + TSS region transcription start site region 138777
Tssr138778 16 52176083 to 52176086 3 + TSS region transcription start site region 138778
Cpgi8315 16 52198260 to 52198696 436 CpG island CpG island 8315
Tssr138779 16 52206799 to 52206837 38 + TSS region transcription start site region 138779
Alcam 16 52248996 to 52453064 204068 - protein coding gene activated leukocyte cell adhesion molecule
Tssr141400 16 52249565 to 52249578 13 - TSS region transcription start site region 141400
Tssr141401 16 52249700 to 52249756 56 - TSS region transcription start site region 141401
Tssr141402 16 52249874 to 52249890 16 - TSS region transcription start site region 141402
Tssr141403 16 52250135 to 52250152 17 - TSS region transcription start site region 141403
Tssr141404 16 52250350 to 52250376 26 - TSS region transcription start site region 141404
Tssr141405 16 52258465 to 52258471 6 - TSS region transcription start site region 141405
Tssr141406 16 52268411 to 52268460 49 - TSS region transcription start site region 141406
Tssr141407 16 52270710 to 52270724 14 - TSS region transcription start site region 141407
Tssr141408 16 52270764 to 52270778 14 - TSS region transcription start site region 141408
D330040H18Rik 16 52271223 to 52273032 1809 unclassified gene RIKEN cDNA D330040H18 gene
Tssr141409 16 52271266 to 52271280 14 - TSS region transcription start site region 141409
Tssr141410 16 52271330 to 52271363 33 - TSS region transcription start site region 141410
Tssr141411 16 52271487 to 52271507 20 - TSS region transcription start site region 141411
Tssr141412 16 52271518 to 52271530 12 - TSS region transcription start site region 141412
Tssr141413 16 52271759 to 52271770 11 - TSS region transcription start site region 141413
Tssr141414 16 52272053 to 52272081 28 - TSS region transcription start site region 141414
Tssr141415 16 52272191 to 52272210 19 - TSS region transcription start site region 141415
Tssr141416 16 52273437 to 52273451 14 - TSS region transcription start site region 141416
Tssr141417 16 52273959 to 52273977 18 - TSS region transcription start site region 141417
Tssr141418 16 52274168 to 52274176 8 - TSS region transcription start site region 141418
Tssr141419 16 52278340 to 52278342 2 - TSS region transcription start site region 141419
Tssr141420 16 52287683 to 52287705 22 - TSS region transcription start site region 141420
Tssr141421 16 52298761 to 52298772 11 - TSS region transcription start site region 141421
Tssr141422 16 52301358 to 52301384 26 - TSS region transcription start site region 141422
Tssr141423 16 52301406 to 52301420 14 - TSS region transcription start site region 141423
Tssr141424 16 52301755 to 52301767 12 - TSS region transcription start site region 141424
Tssr141425 16 52304106 to 52304125 19 - TSS region transcription start site region 141425
Gm32597 16 52330962 to 52337822 6860 + lncRNA gene predicted gene, 32597
Tssr141426 16 52332447 to 52332463 16 - TSS region transcription start site region 141426
Tssr141427 16 52333152 to 52333159 7 - TSS region transcription start site region 141427
Tssr141428 16 52338507 to 52338542 35 - TSS region transcription start site region 141428
Tssr141429 16 52343793 to 52343820 27 - TSS region transcription start site region 141429
Tssr141430 16 52346737 to 52346760 23 - TSS region transcription start site region 141430
Tssr141431 16 52346929 to 52346944 15 - TSS region transcription start site region 141431
Tssr141432 16 52354272 to 52354287 15 - TSS region transcription start site region 141432
Tssr141433 16 52355886 to 52355925 39 - TSS region transcription start site region 141433
Tssr141434 16 52356070 to 52356114 44 - TSS region transcription start site region 141434
Tssr141435 16 52356137 to 52356186 49 - TSS region transcription start site region 141435
Gm41461 16 52358212 to 52365015 6803 - lncRNA gene predicted gene, 41461
Tssr141436 16 52361886 to 52361888 2 - TSS region transcription start site region 141436
Tssr141437 16 52366446 to 52366455 9 - TSS region transcription start site region 141437
Tssr141438 16 52366874 to 52366881 7 - TSS region transcription start site region 141438
Tssr141439 16 52372697 to 52372702 5 - TSS region transcription start site region 141439
Tssr141440 16 52376427 to 52376438 11 - TSS region transcription start site region 141440
Tssr141441 16 52386804 to 52386815 11 - TSS region transcription start site region 141441
Tssr141442 16 52388856 to 52388867 11 - TSS region transcription start site region 141442
Tssr141443 16 52389471 to 52389491 20 - TSS region transcription start site region 141443
Tssr141444 16 52390388 to 52390408 20 - TSS region transcription start site region 141444
Tssr141445 16 52394784 to 52394824 40 - TSS region transcription start site region 141445
Tssr141446 16 52396274 to 52396295 21 - TSS region transcription start site region 141446
Tssr141447 16 52400393 to 52400406 13 - TSS region transcription start site region 141447
Tssr141448 16 52400464 to 52400475 11 - TSS region transcription start site region 141448
Tssr141449 16 52400532 to 52400570 38 - TSS region transcription start site region 141449
Tssr141450 16 52400590 to 52400613 23 - TSS region transcription start site region 141450
Tssr141451 16 52400633 to 52400650 17 - TSS region transcription start site region 141451
Tssr141452 16 52402489 to 52402492 3 - TSS region transcription start site region 141452
Tssr141453 16 52403302 to 52403318 16 - TSS region transcription start site region 141453
Tssr141454 16 52404435 to 52404438 3 - TSS region transcription start site region 141454
Tssr141455 16 52406724 to 52406736 12 - TSS region transcription start site region 141455
Tssr141456 16 52407596 to 52407609 13 - TSS region transcription start site region 141456
Tssr141457 16 52407623 to 52407669 46 - TSS region transcription start site region 141457
Tssr141458 16 52407677 to 52407698 21 - TSS region transcription start site region 141458
Tssr141459 16 52407700 to 52407711 11 - TSS region transcription start site region 141459
Tssr141460 16 52407734 to 52407754 20 - TSS region transcription start site region 141460
Tssr141461 16 52407758 to 52407769 11 - TSS region transcription start site region 141461
Tssr141462 16 52407812 to 52407820 8 - TSS region transcription start site region 141462
Tssr141463 16 52411572 to 52411583 11 - TSS region transcription start site region 141463
Tssr141464 16 52411678 to 52411690 12 - TSS region transcription start site region 141464
Tssr141465 16 52411716 to 52411754 38 - TSS region transcription start site region 141465
Tssr141466 16 52411760 to 52411778 18 - TSS region transcription start site region 141466
Tssr138780 16 52413923 to 52413933 10 + TSS region transcription start site region 138780
6720473M08Rik 16 52414282 to 52422210 7928 unclassified gene RIKEN cDNA 6720473M08 gene
Tssr141467 16 52417623 to 52417638 15 - TSS region transcription start site region 141467
Tssr141468 16 52418439 to 52418478 39 - TSS region transcription start site region 141468
Tssr141469 16 52419910 to 52419919 9 - TSS region transcription start site region 141469
Tssr141470 16 52419951 to 52419963 12 - TSS region transcription start site region 141470
Tssr141471 16 52419997 to 52420015 18 - TSS region transcription start site region 141471
Tssr141472 16 52420019 to 52420030 11 - TSS region transcription start site region 141472
Tssr141473 16 52420046 to 52420072 26 - TSS region transcription start site region 141473
Tssr141474 16 52420124 to 52420135 11 - TSS region transcription start site region 141474
Tssr141475 16 52420260 to 52420275 15 - TSS region transcription start site region 141475
Tssr141476 16 52424351 to 52424392 41 - TSS region transcription start site region 141476
Tssr141477 16 52424436 to 52424454 18 - TSS region transcription start site region 141477
Tssr141478 16 52424577 to 52424581 4 - TSS region transcription start site region 141478
Tssr141479 16 52424704 to 52424720 16 - TSS region transcription start site region 141479
Tssr141480 16 52424917 to 52424940 23 - TSS region transcription start site region 141480
Tssr138781 16 52426162 to 52426180 18 + TSS region transcription start site region 138781
Tssr141481 16 52427002 to 52427009 7 - TSS region transcription start site region 141481
Tssr141482 16 52427518 to 52427538 20 - TSS region transcription start site region 141482
Tssr141483 16 52427802 to 52427841 39 - TSS region transcription start site region 141483
Tssr141484 16 52429489 to 52429498 9 - TSS region transcription start site region 141484
Tssr141485 16 52434495 to 52434507 12 - TSS region transcription start site region 141485
Tssr141486 16 52436269 to 52436285 16 - TSS region transcription start site region 141486
Tssr141487 16 52436497 to 52436515 18 - TSS region transcription start site region 141487
Tssr141488 16 52438329 to 52438330 1 - TSS region transcription start site region 141488
Tssr141489 16 52442291 to 52442299 8 - TSS region transcription start site region 141489
Tssr141490 16 52442364 to 52442375 11 - TSS region transcription start site region 141490
Cpgi8316 16 52450414 to 52450726 312 CpG island CpG island 8316
Tssr141491 16 52451875 to 52451887 12 - TSS region transcription start site region 141491
Cpgi8317 16 52452246 to 52453669 1423 CpG island CpG island 8317
Tssr141492 16 52452613 to 52452677 64 - TSS region transcription start site region 141492
Tssr141493 16 52452958 to 52452983 25 - TSS region transcription start site region 141493
Tssr141494 16 52452989 to 52453013 24 - TSS region transcription start site region 141494
Tssr141495 16 52453017 to 52453028 11 - TSS region transcription start site region 141495
Tssr141496 16 52453161 to 52453188 27 - TSS region transcription start site region 141496
Tssr138782 16 52453338 to 52453415 77 + TSS region transcription start site region 138782
Tssr141497 16 52468527 to 52468557 30 - TSS region transcription start site region 141497
Tssr4910 16 52468560 to 52468565 5 - TSS region transcription start site region 4910
Tssr138783 16 52468679 to 52468688 9 + TSS region transcription start site region 138783
Tssr141498 16 52468757 to 52468774 17 - TSS region transcription start site region 141498
Gm49634 16 52581172 to 52581408 236 - pseudogene predicted gene, 49634
Tssr138784 16 52746469 to 52746473 4 + TSS region transcription start site region 138784
4930404A05Rik 16 52799508 to 52815744 16236 - lincRNA gene RIKEN cDNA 4930404A05 gene
Tssr141499 16 52815758 to 52815767 9 - TSS region transcription start site region 141499
4930405D01Rik 16 52828813 to 52953947 125134 + lincRNA gene RIKEN cDNA 4930405D01 gene
Tssr138785 16 52829129 to 52829138 9 + TSS region transcription start site region 138785
Gm25723 16 52946804 to 52946929 125 - snoRNA gene predicted gene, 25723
Tssr141500 16 53246522 to 53246548 26 - TSS region transcription start site region 141500
Gm22459 16 53404086 to 53404193 107 - snoRNA gene predicted gene, 22459
Gm49637 16 53479282 to 53479684 402 - pseudogene predicted gene, 49637
Tssr138786 16 53576459 to 53576466 7 + TSS region transcription start site region 138786
Gm49638 16 53619529 to 53620067 538 - pseudogene predicted gene, 49638
Gm25041 16 53885370 to 53885434 64 + miRNA gene predicted gene, 25041
D16Mit30 16 53962550 to 53962701 151 DNA segment DNA segment, Chr 16, Massachusetts Institute of Technology 30
Gm5487 16 53983928 to 53986084 2156 + pseudogene predicted gene 5487
Tssr4911 16 54166296 to 54166298 2 - TSS region transcription start site region 4911
Gm49639 16 54350124 to 54350328 204 - pseudogene predicted gene, 49639
Gm25853 16 54354462 to 54354593 131 + snoRNA gene predicted gene, 25853
Gm46541 16 54582791 to 54583197 406 - pseudogene predicted gene, 46541
Gm23180 16 54628428 to 54628552 124 + snoRNA gene predicted gene, 23180
D16Mit46 16 54685934 to 54686174 240 DNA segment DNA segment, Chr 16, Massachusetts Institute of Technology 46
Gm8881 16 54826498 to 54827894 1396 - pseudogene predicted gene 8881
D16Mit199 16 54915710 to 54915817 107 DNA segment DNA Segment, Chr 16, Massachusetts Institute of Technology 199
Gm22977 16 54972431 to 54972537 106 + snRNA gene predicted gene, 22977
Gm5769 16 55074405 to 55074986 581 + pseudogene predicted gene 5769
Zpld1 16 55225175 to 55297986 72811 - protein coding gene zona pellucida like domain containing 1
D16Mit221 16 55231923 to 55232039 116 DNA segment DNA Segment, Chr 16, Massachusetts Institute of Technology 221
Tssr4912 16 55262155 to 55262159 4 + TSS region transcription start site region 4912
Tssr4913 16 55282923 to 55282958 35 - TSS region transcription start site region 4913
Tssr4914 16 55283235 to 55283240 5 - TSS region transcription start site region 4914
Tssr141501 16 55283281 to 55283287 6 - TSS region transcription start site region 141501
Gm45968 16 55420838 to 55582490 161652 - lncRNA gene predicted gene, 45968
Mir5118 16 55494731 to 55494797 66 + miRNA gene microRNA 5118
Tssr141502 16 55522302 to 55522311 9 - TSS region transcription start site region 141502
Tssr141503 16 55523668 to 55523679 11 - TSS region transcription start site region 141503
Tssr141504 16 55523680 to 55523701 21 - TSS region transcription start site region 141504
Tssr141505 16 55523731 to 55523746 15 - TSS region transcription start site region 141505
Tssr141506 16 55523781 to 55523784 3 - TSS region transcription start site region 141506
Tssr138787 16 55526261 to 55526266 5 + TSS region transcription start site region 138787
D16Mit127 16 55533975 to 55534078 103 DNA segment DNA segment, Chr 16, Massachusetts Institute of Technology 127
Tssr4915 16 55551216 to 55551219 3 + TSS region transcription start site region 4915
Gm23003 16 55594782 to 55594888 106 - snRNA gene predicted gene, 23003
D16Mit184 16 55603180 to 55603377 197 DNA segment DNA segment, Chr 16, Massachusetts Institute of Technology 184
Gm19771 16 55739918 to 55740152 234 + pseudogene predicted gene, 19771
Gm26369 16 55779045 to 55779144 99 - snRNA gene predicted gene, 26369