MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 16:5117109-5217271

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Ppl	16	5086291 to 5132421	46130	-	protein coding gene	periplakin
Cpgi7928	16	5131622 to 5133098	1476		CpG island	CpG island 7928
Tssr139834	16	5132458 to 5132483	25	-	TSS region	transcription start site region 139834
Tssr139835	16	5132488 to 5132513	25	-	TSS region	transcription start site region 139835
Tssr136904	16	5146941 to 5146959	18	+	TSS region	transcription start site region 136904
Tssr136905	16	5146960 to 5146981	21	+	TSS region	transcription start site region 136905
Tssr136906	16	5146985 to 5146996	11	+	TSS region	transcription start site region 136906
Sec14l5	16	5147109 to 5187271	40162	+	protein coding gene	SEC14-like lipid binding 5
D16Mit207	16	5193429 to 5193564	135		DNA segment	DNA Segment, Chr 16, Massachusetts Institute of Technology-207
Nagpa	16	5195289 to 5204012	8723	-	protein coding gene	N-acetylglucosamine-1-phosphodiester alpha-N-acetylglucosaminidase
Tssr139836	16	5195597 to 5195622	25	-	TSS region	transcription start site region 139836
Tssr139837	16	5195935 to 5195949	14	-	TSS region	transcription start site region 139837
Tssr139838	16	5196491 to 5196493	2	-	TSS region	transcription start site region 139838
Cpgi7929	16	5203068 to 5204100	1032		CpG island	CpG island 7929
Tssr139839	16	5203947 to 5203964	17	-	TSS region	transcription start site region 139839
Tssr139840	16	5203981 to 5204017	36	-	TSS region	transcription start site region 139840
AU021092	16	5211823 to 5222299	10476	-	protein coding gene	expressed sequence AU021092
Mir6364	16	5215789 to 5215874	85	-	miRNA gene	microRNA 6364