Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 16:50682452-52043832

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42 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Loh2 16 21827564 to 51386028 29558464 heritable phenotypic marker loss of heterozygosity, region 2
Tssr141384 16 50721440 to 50721476 36 - TSS region transcription start site region 141384
Tssr141385 16 50721540 to 50721548 8 - TSS region transcription start site region 141385
Tssr141386 16 50722791 to 50722802 11 - TSS region transcription start site region 141386
Tssr141387 16 50722824 to 50722852 28 - TSS region transcription start site region 141387
Tssr141388 16 50722872 to 50722887 15 - TSS region transcription start site region 141388
Tssr141389 16 50723382 to 50723397 15 - TSS region transcription start site region 141389
Dubr 16 50726751 to 50732773 6022 - lincRNA gene Dppa2 upstream binding RNA
Mir6363 16 50727132 to 50727245 113 + miRNA gene microRNA 6363
Cpgi8313 16 50732180 to 50733017 837 CpG island CpG island 8313
Tssr141390 16 50732209 to 50732220 11 - TSS region transcription start site region 141390
Tssr141391 16 50732680 to 50732701 21 - TSS region transcription start site region 141391
Tssr141392 16 50732707 to 50732775 68 - TSS region transcription start site region 141392
Tssr138759 16 50732825 to 50732866 41 + TSS region transcription start site region 138759
5830440H09Rik 16 50752339 to 50753475 1136 unclassified gene RIKEN cDNA 5830440H09 gene
Tssr138760 16 50783391 to 50783423 32 + TSS region transcription start site region 138760
1700116B05Rik 16 50783409 to 50784091 682 + lincRNA gene RIKEN cDNA 1700116B05 gene
Tssr138761 16 50783434 to 50783444 10 + TSS region transcription start site region 138761
Tssr138762 16 50783447 to 50783460 13 + TSS region transcription start site region 138762
Gm24925 16 50920542 to 50920648 106 - snRNA gene predicted gene, 24925
Gm7280 16 51016494 to 51016907 413 - pseudogene predicted gene 7280
Gm32431 16 51051130 to 51053004 1874 + lincRNA gene predicted gene, 32431
D16Mit168 16 51298497 to 51298646 149 DNA segment DNA segment, Chr 16, Massachusetts Institute of Technology 168
D16Mit157 16 51315305 to 51315435 130 DNA segment DNA segment, Chr 16, Massachusetts Institute of Technology 157
Gm6767 16 51362452 to 51363832 1380 - pseudogene predicted gene 6767
Tssr141393 16 51363889 to 51363901 12 - TSS region transcription start site region 141393
D16Mit14 16 51385838 to 51386028 190 DNA segment DNA segment, Chr 16, Massachusetts Institute of Technology 14
Gm49608 16 51416634 to 51416948 314 - pseudogene predicted gene, 49608
Milac7 16 51442133 to 51442133 0 QTL methamphetamine induced locomotor activation 7
D16Mit113 16 51455690 to 51455825 135 DNA segment DNA segment, Chr 16, Massachusetts Institute of Technology 113
Tssr141394 16 51686759 to 51686767 8 - TSS region transcription start site region 141394
Tssr141395 16 51736241 to 51736245 4 - TSS region transcription start site region 141395
Tssr141396 16 51930006 to 51930023 17 - TSS region transcription start site region 141396
Gm29686 16 51981033 to 51987287 6254 - lncRNA gene predicted gene, 29686
Cpgi8314 16 52031157 to 52032353 1196 CpG island CpG island 8314
Cblb 16 52031230 to 52208047 176817 + protein coding gene Casitas B-lineage lymphoma b
Tssr138763 16 52031324 to 52031342 18 + TSS region transcription start site region 138763
Tssr138764 16 52031555 to 52031570 15 + TSS region transcription start site region 138764
Tssr138765 16 52031585 to 52031646 61 + TSS region transcription start site region 138765
Tssr138766 16 52032071 to 52032126 55 + TSS region transcription start site region 138766
Tssr138767 16 52032557 to 52032572 15 + TSS region transcription start site region 138767
Tssr138768 16 52033931 to 52033937 6 + TSS region transcription start site region 138768