Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 16:49738991-50078995

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104 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Ift57 16 49699294 to 49765126 65832 + protein coding gene intraflagellar transport 57
Tssr138711 16 49739223 to 49739226 3 + TSS region transcription start site region 138711
Tssr138712 16 49757364 to 49757369 5 + TSS region transcription start site region 138712
Gm15518 16 49759703 to 49775922 16219 - antisense lncRNA gene predicted gene 15518
Tssr141324 16 49768695 to 49768709 14 - TSS region transcription start site region 141324
Tssr141325 16 49768727 to 49768738 11 - TSS region transcription start site region 141325
Tssr141326 16 49768751 to 49768779 28 - TSS region transcription start site region 141326
Tssr141327 16 49768791 to 49768802 11 - TSS region transcription start site region 141327
Tssr141328 16 49769794 to 49769822 28 - TSS region transcription start site region 141328
Tssr138713 16 49770612 to 49770623 11 + TSS region transcription start site region 138713
Tssr141329 16 49770790 to 49770803 13 - TSS region transcription start site region 141329
Tssr141330 16 49770805 to 49770817 12 - TSS region transcription start site region 141330
Tssr141331 16 49770818 to 49770836 18 - TSS region transcription start site region 141331
Tssr141332 16 49770846 to 49770863 17 - TSS region transcription start site region 141332
Tssr141333 16 49771681 to 49771694 13 - TSS region transcription start site region 141333
Tssr141334 16 49771836 to 49771848 12 - TSS region transcription start site region 141334
Tssr141335 16 49772770 to 49772785 15 - TSS region transcription start site region 141335
Tssr138714 16 49772826 to 49772840 14 + TSS region transcription start site region 138714
Tssr4897 16 49775236 to 49775240 4 + TSS region transcription start site region 4897
D16Mit63 16 49777226 to 49777427 201 DNA segment DNA segment, Chr 16, Massachusetts Institute of Technology 63
Tssr138715 16 49781808 to 49781827 19 + TSS region transcription start site region 138715
Tssr138716 16 49782030 to 49782045 15 + TSS region transcription start site region 138716
Tssr141336 16 49783439 to 49783446 7 - TSS region transcription start site region 141336
Tssr141337 16 49790951 to 49790973 22 - TSS region transcription start site region 141337
Tssr138717 16 49791159 to 49791169 10 + TSS region transcription start site region 138717
Tssr138718 16 49791171 to 49791185 14 + TSS region transcription start site region 138718
Tssr141338 16 49792515 to 49792528 13 - TSS region transcription start site region 141338
Tssr4898 16 49792597 to 49792615 18 - TSS region transcription start site region 4898
Tssr141339 16 49792780 to 49792784 4 - TSS region transcription start site region 141339
Tssr141340 16 49799785 to 49799806 21 - TSS region transcription start site region 141340
Gm16619 16 49800226 to 49848427 48201 + lincRNA gene predicted gene, 16619
Tssr138719 16 49800520 to 49800547 27 + TSS region transcription start site region 138719
Tssr141341 16 49801098 to 49801122 24 - TSS region transcription start site region 141341
Tssr141342 16 49801640 to 49801672 32 - TSS region transcription start site region 141342
Gm4633 16 49811731 to 49855213 43482 - unclassified gene predicted gene 4633
Tssr141343 16 49839826 to 49839848 22 - TSS region transcription start site region 141343
Tssr141344 16 49840028 to 49840046 18 - TSS region transcription start site region 141344
Tssr138720 16 49840237 to 49840249 12 + TSS region transcription start site region 138720
Tssr138721 16 49840363 to 49840372 9 + TSS region transcription start site region 138721
Tssr138722 16 49843045 to 49843055 10 + TSS region transcription start site region 138722
Tssr141345 16 49847648 to 49847676 28 - TSS region transcription start site region 141345
Tssr141346 16 49848068 to 49848085 17 - TSS region transcription start site region 141346
Tssr141347 16 49848779 to 49848794 15 - TSS region transcription start site region 141347
Tssr138723 16 49853154 to 49853177 23 + TSS region transcription start site region 138723
Tssr138724 16 49854347 to 49854359 12 + TSS region transcription start site region 138724
Tssr138725 16 49854537 to 49854544 7 + TSS region transcription start site region 138725
Tssr138726 16 49855089 to 49855100 11 + TSS region transcription start site region 138726
Tssr4899 16 49855106 to 49855116 10 + TSS region transcription start site region 4899
Cpgi8307 16 49855114 to 49856222 1108 CpG island CpG island 8307
Tssr138727 16 49855119 to 49855130 11 + TSS region transcription start site region 138727
Cd47 16 49855253 to 49912424 57171 + protein coding gene CD47 antigen (Rh-related antigen, integrin-associated signal transducer)
Tssr4900 16 49855260 to 49855266 6 + TSS region transcription start site region 4900
Tssr141348 16 49855297 to 49855312 15 - TSS region transcription start site region 141348
Tssr138728 16 49855349 to 49855360 11 + TSS region transcription start site region 138728
Tssr4901 16 49855370 to 49855387 17 + TSS region transcription start site region 4901
Tssr4902 16 49855485 to 49855497 12 + TSS region transcription start site region 4902
Tssr141349 16 49855517 to 49855572 55 - TSS region transcription start site region 141349
Tssr138729 16 49855624 to 49855722 98 + TSS region transcription start site region 138729
Tssr138730 16 49855745 to 49855756 11 + TSS region transcription start site region 138730
Tssr4903 16 49855767 to 49855806 39 + TSS region transcription start site region 4903
Tssr141350 16 49855832 to 49855843 11 - TSS region transcription start site region 141350
Tssr138731 16 49856072 to 49856112 40 + TSS region transcription start site region 138731
Tssr141351 16 49856116 to 49856128 12 - TSS region transcription start site region 141351
Tssr138732 16 49856218 to 49856250 32 + TSS region transcription start site region 138732
Tssr138733 16 49856306 to 49856331 25 + TSS region transcription start site region 138733
Tssr141352 16 49856347 to 49856380 33 - TSS region transcription start site region 141352
Tssr138734 16 49856558 to 49856569 11 + TSS region transcription start site region 138734
Tssr138735 16 49856596 to 49856619 23 + TSS region transcription start site region 138735
Tssr138736 16 49857880 to 49857890 10 + TSS region transcription start site region 138736
Tssr138737 16 49867853 to 49867868 15 + TSS region transcription start site region 138737
Tssr138738 16 49894207 to 49894220 13 + TSS region transcription start site region 138738
Tssr138739 16 49904736 to 49904747 11 + TSS region transcription start site region 138739
Tssr138740 16 49908362 to 49908368 6 + TSS region transcription start site region 138740
Tssr138741 16 49908991 to 49908995 4 + TSS region transcription start site region 138741
Tssr138742 16 49911454 to 49911476 22 + TSS region transcription start site region 138742
Tssr138743 16 49911874 to 49911894 20 + TSS region transcription start site region 138743
Tssr138744 16 49911985 to 49912008 23 + TSS region transcription start site region 138744
Tssr138745 16 49912870 to 49912875 5 + TSS region transcription start site region 138745
Tssr4904 16 49913165 to 49913167 2 + TSS region transcription start site region 4904
Tssr4905 16 49913252 to 49913260 8 + TSS region transcription start site region 4905
Tssr4906 16 49913292 to 49913297 5 + TSS region transcription start site region 4906
Tssr4907 16 49913536 to 49913556 20 + TSS region transcription start site region 4907
Tssr138746 16 49913578 to 49913594 16 + TSS region transcription start site region 138746
Tssr4908 16 49913715 to 49913756 41 + TSS region transcription start site region 4908
Gm5486 16 49925912 to 49970258 44346 - unclassified gene predicted gene 5486
Tssr138747 16 49955791 to 49955795 4 + TSS region transcription start site region 138747
Tssr138748 16 49955808 to 49955834 26 + TSS region transcription start site region 138748
Gm19723 16 49955827 to 49958914 3087 + lncRNA gene predicted gene, 19723
Tssr138749 16 49955855 to 49955856 1 + TSS region transcription start site region 138749
Tssr138750 16 49970774 to 49970786 12 + TSS region transcription start site region 138750
Gm6936 16 49980460 to 49997475 17015 + lncRNA gene predicted gene 6936
Gm4827 16 50019658 to 50072852 53194 - lncRNA gene predicted gene 4827
Tssr138751 16 50044238 to 50044258 20 + TSS region transcription start site region 138751
Tssr138752 16 50044362 to 50044374 12 + TSS region transcription start site region 138752
Cpgi8308 16 50045810 to 50046256 446 CpG island CpG island 8308
Tssr141353 16 50046243 to 50046251 8 - TSS region transcription start site region 141353
Tssr141354 16 50046283 to 50046294 11 - TSS region transcription start site region 141354
Tssr138753 16 50046428 to 50046448 20 + TSS region transcription start site region 138753
Gm32101 16 50049630 to 50051658 2028 + lncRNA gene predicted gene, 32101
Tssr141355 16 50070709 to 50070719 10 - TSS region transcription start site region 141355
Tssr141356 16 50070735 to 50070755 20 - TSS region transcription start site region 141356
Tssr141357 16 50070855 to 50070870 15 - TSS region transcription start site region 141357
Tssr141358 16 50070878 to 50070904 26 - TSS region transcription start site region 141358
Tssr138754 16 50072605 to 50072610 5 + TSS region transcription start site region 138754