Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 16:49685612-49855623

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60 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi8306 16 49698950 to 49699649 699 CpG island CpG island 8306
Tssr141323 16 49699007 to 49699022 15 - TSS region transcription start site region 141323
Tssr138710 16 49699198 to 49699299 101 + TSS region transcription start site region 138710
Ift57 16 49699294 to 49765126 65832 + protein coding gene intraflagellar transport 57
Tssr138711 16 49739223 to 49739226 3 + TSS region transcription start site region 138711
Tssr138712 16 49757364 to 49757369 5 + TSS region transcription start site region 138712
Gm15518 16 49759703 to 49775922 16219 - antisense lncRNA gene predicted gene 15518
Tssr141324 16 49768695 to 49768709 14 - TSS region transcription start site region 141324
Tssr141325 16 49768727 to 49768738 11 - TSS region transcription start site region 141325
Tssr141326 16 49768751 to 49768779 28 - TSS region transcription start site region 141326
Tssr141327 16 49768791 to 49768802 11 - TSS region transcription start site region 141327
Tssr141328 16 49769794 to 49769822 28 - TSS region transcription start site region 141328
Tssr138713 16 49770612 to 49770623 11 + TSS region transcription start site region 138713
Tssr141329 16 49770790 to 49770803 13 - TSS region transcription start site region 141329
Tssr141330 16 49770805 to 49770817 12 - TSS region transcription start site region 141330
Tssr141331 16 49770818 to 49770836 18 - TSS region transcription start site region 141331
Tssr141332 16 49770846 to 49770863 17 - TSS region transcription start site region 141332
Tssr141333 16 49771681 to 49771694 13 - TSS region transcription start site region 141333
Tssr141334 16 49771836 to 49771848 12 - TSS region transcription start site region 141334
Tssr141335 16 49772770 to 49772785 15 - TSS region transcription start site region 141335
Tssr138714 16 49772826 to 49772840 14 + TSS region transcription start site region 138714
Tssr4897 16 49775236 to 49775240 4 + TSS region transcription start site region 4897
D16Mit63 16 49777226 to 49777427 201 DNA segment DNA segment, Chr 16, Massachusetts Institute of Technology 63
Tssr138715 16 49781808 to 49781827 19 + TSS region transcription start site region 138715
Tssr138716 16 49782030 to 49782045 15 + TSS region transcription start site region 138716
Tssr141336 16 49783439 to 49783446 7 - TSS region transcription start site region 141336
Tssr141337 16 49790951 to 49790973 22 - TSS region transcription start site region 141337
Tssr138717 16 49791159 to 49791169 10 + TSS region transcription start site region 138717
Tssr138718 16 49791171 to 49791185 14 + TSS region transcription start site region 138718
Tssr141338 16 49792515 to 49792528 13 - TSS region transcription start site region 141338
Tssr4898 16 49792597 to 49792615 18 - TSS region transcription start site region 4898
Tssr141339 16 49792780 to 49792784 4 - TSS region transcription start site region 141339
Tssr141340 16 49799785 to 49799806 21 - TSS region transcription start site region 141340
Gm16619 16 49800226 to 49848427 48201 + lincRNA gene predicted gene, 16619
Tssr138719 16 49800520 to 49800547 27 + TSS region transcription start site region 138719
Tssr141341 16 49801098 to 49801122 24 - TSS region transcription start site region 141341
Tssr141342 16 49801640 to 49801672 32 - TSS region transcription start site region 141342
Gm4633 16 49811731 to 49855213 43482 - unclassified gene predicted gene 4633
Tssr141343 16 49839826 to 49839848 22 - TSS region transcription start site region 141343
Tssr141344 16 49840028 to 49840046 18 - TSS region transcription start site region 141344
Tssr138720 16 49840237 to 49840249 12 + TSS region transcription start site region 138720
Tssr138721 16 49840363 to 49840372 9 + TSS region transcription start site region 138721
Tssr138722 16 49843045 to 49843055 10 + TSS region transcription start site region 138722
Tssr141345 16 49847648 to 49847676 28 - TSS region transcription start site region 141345
Tssr141346 16 49848068 to 49848085 17 - TSS region transcription start site region 141346
Tssr141347 16 49848779 to 49848794 15 - TSS region transcription start site region 141347
Tssr138723 16 49853154 to 49853177 23 + TSS region transcription start site region 138723
Tssr138724 16 49854347 to 49854359 12 + TSS region transcription start site region 138724
Tssr138725 16 49854537 to 49854544 7 + TSS region transcription start site region 138725
Tssr138726 16 49855089 to 49855100 11 + TSS region transcription start site region 138726
Tssr4899 16 49855106 to 49855116 10 + TSS region transcription start site region 4899
Cpgi8307 16 49855114 to 49856222 1108 CpG island CpG island 8307
Tssr138727 16 49855119 to 49855130 11 + TSS region transcription start site region 138727
Cd47 16 49855253 to 49912424 57171 + protein coding gene CD47 antigen (Rh-related antigen, integrin-associated signal transducer)
Tssr4900 16 49855260 to 49855266 6 + TSS region transcription start site region 4900
Tssr141348 16 49855297 to 49855312 15 - TSS region transcription start site region 141348
Tssr138728 16 49855349 to 49855360 11 + TSS region transcription start site region 138728
Tssr4901 16 49855370 to 49855387 17 + TSS region transcription start site region 4901
Tssr4902 16 49855485 to 49855497 12 + TSS region transcription start site region 4902
Tssr141349 16 49855517 to 49855572 55 - TSS region transcription start site region 141349