Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 16:49544007-49854022

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51 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm35938 16 49562934 to 49568000 5066 - protein coding gene predicted gene, 35938
Gm31494 16 49572319 to 49644652 72333 - lncRNA gene predicted gene, 31494
D16Mit42 16 49620462 to 49620585 123 DNA segment DNA segment, Chr 16, Massachusetts Institute of Technology 42
D16Mit196 16 49662817 to 49662939 122 DNA segment DNA Segment, Chr 16, Massachusetts Institute of Technology 196
Cpgi8306 16 49698950 to 49699649 699 CpG island CpG island 8306
Tssr141323 16 49699007 to 49699022 15 - TSS region transcription start site region 141323
Tssr138710 16 49699198 to 49699299 101 + TSS region transcription start site region 138710
Ift57 16 49699294 to 49765126 65832 + protein coding gene intraflagellar transport 57
Tssr138711 16 49739223 to 49739226 3 + TSS region transcription start site region 138711
Tssr138712 16 49757364 to 49757369 5 + TSS region transcription start site region 138712
Gm15518 16 49759703 to 49775922 16219 - antisense lncRNA gene predicted gene 15518
Tssr141324 16 49768695 to 49768709 14 - TSS region transcription start site region 141324
Tssr141325 16 49768727 to 49768738 11 - TSS region transcription start site region 141325
Tssr141326 16 49768751 to 49768779 28 - TSS region transcription start site region 141326
Tssr141327 16 49768791 to 49768802 11 - TSS region transcription start site region 141327
Tssr141328 16 49769794 to 49769822 28 - TSS region transcription start site region 141328
Tssr138713 16 49770612 to 49770623 11 + TSS region transcription start site region 138713
Tssr141329 16 49770790 to 49770803 13 - TSS region transcription start site region 141329
Tssr141330 16 49770805 to 49770817 12 - TSS region transcription start site region 141330
Tssr141331 16 49770818 to 49770836 18 - TSS region transcription start site region 141331
Tssr141332 16 49770846 to 49770863 17 - TSS region transcription start site region 141332
Tssr141333 16 49771681 to 49771694 13 - TSS region transcription start site region 141333
Tssr141334 16 49771836 to 49771848 12 - TSS region transcription start site region 141334
Tssr141335 16 49772770 to 49772785 15 - TSS region transcription start site region 141335
Tssr138714 16 49772826 to 49772840 14 + TSS region transcription start site region 138714
Tssr4897 16 49775236 to 49775240 4 + TSS region transcription start site region 4897
D16Mit63 16 49777226 to 49777427 201 DNA segment DNA segment, Chr 16, Massachusetts Institute of Technology 63
Tssr138715 16 49781808 to 49781827 19 + TSS region transcription start site region 138715
Tssr138716 16 49782030 to 49782045 15 + TSS region transcription start site region 138716
Tssr141336 16 49783439 to 49783446 7 - TSS region transcription start site region 141336
Tssr141337 16 49790951 to 49790973 22 - TSS region transcription start site region 141337
Tssr138717 16 49791159 to 49791169 10 + TSS region transcription start site region 138717
Tssr138718 16 49791171 to 49791185 14 + TSS region transcription start site region 138718
Tssr141338 16 49792515 to 49792528 13 - TSS region transcription start site region 141338
Tssr4898 16 49792597 to 49792615 18 - TSS region transcription start site region 4898
Tssr141339 16 49792780 to 49792784 4 - TSS region transcription start site region 141339
Tssr141340 16 49799785 to 49799806 21 - TSS region transcription start site region 141340
Gm16619 16 49800226 to 49848427 48201 + lincRNA gene predicted gene, 16619
Tssr138719 16 49800520 to 49800547 27 + TSS region transcription start site region 138719
Tssr141341 16 49801098 to 49801122 24 - TSS region transcription start site region 141341
Tssr141342 16 49801640 to 49801672 32 - TSS region transcription start site region 141342
Gm4633 16 49811731 to 49855213 43482 - unclassified gene predicted gene 4633
Tssr141343 16 49839826 to 49839848 22 - TSS region transcription start site region 141343
Tssr141344 16 49840028 to 49840046 18 - TSS region transcription start site region 141344
Tssr138720 16 49840237 to 49840249 12 + TSS region transcription start site region 138720
Tssr138721 16 49840363 to 49840372 9 + TSS region transcription start site region 138721
Tssr138722 16 49843045 to 49843055 10 + TSS region transcription start site region 138722
Tssr141345 16 49847648 to 49847676 28 - TSS region transcription start site region 141345
Tssr141346 16 49848068 to 49848085 17 - TSS region transcription start site region 141346
Tssr141347 16 49848779 to 49848794 15 - TSS region transcription start site region 141347
Tssr138723 16 49853154 to 49853177 23 + TSS region transcription start site region 138723