Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 16:48860641-49605772

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51 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr138692 16 48870941 to 48870949 8 + TSS region transcription start site region 138692
Tssr138693 16 48870969 to 48870979 10 + TSS region transcription start site region 138693
Tssr141314 16 48871898 to 48871909 11 - TSS region transcription start site region 141314
Tssr138694 16 48871994 to 48872009 15 + TSS region transcription start site region 138694
Tssr138695 16 48872024 to 48872049 25 + TSS region transcription start site region 138695
Tssr138696 16 48872050 to 48872070 20 + TSS region transcription start site region 138696
Tssr4891 16 48872431 to 48872448 17 - TSS region transcription start site region 4891
Tssr141315 16 48872466 to 48872491 25 - TSS region transcription start site region 141315
Tssr138697 16 48872613 to 48872626 13 + TSS region transcription start site region 138697
Retnlg 16 48872621 to 48874496 1875 + protein coding gene resistin like gamma
Tssr138698 16 48872637 to 48872650 13 + TSS region transcription start site region 138698
Tssr138699 16 48872678 to 48872688 10 + TSS region transcription start site region 138699
Tssr138700 16 48872697 to 48872800 103 + TSS region transcription start site region 138700
Tssr138701 16 48872818 to 48872825 7 + TSS region transcription start site region 138701
Tssr138702 16 48872839 to 48872846 7 + TSS region transcription start site region 138702
Tssr138703 16 48872855 to 48872865 10 + TSS region transcription start site region 138703
Tssr138704 16 48872950 to 48872961 11 + TSS region transcription start site region 138704
Tssr141316 16 48872968 to 48872996 28 - TSS region transcription start site region 141316
Tssr4892 16 48873089 to 48873103 14 + TSS region transcription start site region 4892
Tssr138705 16 48873309 to 48873343 34 + TSS region transcription start site region 138705
Tssr138706 16 48873623 to 48873638 15 + TSS region transcription start site region 138706
Tssr4893 16 48874071 to 48874078 7 + TSS region transcription start site region 4893
Tssr4894 16 48874320 to 48874327 7 + TSS region transcription start site region 4894
Tssr4895 16 48874353 to 48874376 23 - TSS region transcription start site region 4895
Tssr4896 16 48874378 to 48874411 33 - TSS region transcription start site region 4896
Tssr141317 16 48874490 to 48874496 6 - TSS region transcription start site region 141317
Dzip3 16 48924228 to 48994153 69925 - protein coding gene DAZ interacting protein 3, zinc finger
Gm22576 16 48942999 to 48943102 103 - snRNA gene predicted gene, 22576
Cpgi8305 16 48993495 to 48994569 1074 CpG island CpG island 8305
Tssr141318 16 48993931 to 48993949 18 - TSS region transcription start site region 141318
Tssr141319 16 48994081 to 48994123 42 - TSS region transcription start site region 141319
Cip2a 16 48994188 to 49019705 25517 + protein coding gene cell proliferation regulating inhibitor of protein phosphatase 2A
Tssr138707 16 48994197 to 48994239 42 + TSS region transcription start site region 138707
Tssr138708 16 49057399 to 49057413 14 + TSS region transcription start site region 138708
Myh15 16 49057486 to 49199104 141618 + protein coding gene myosin, heavy chain 15
Tssr138709 16 49078886 to 49078894 8 + TSS region transcription start site region 138709
1700026J12Rik 16 49210641 to 49255772 45131 - lincRNA gene RIKEN cDNA 1700026J12 gene
Tssr141320 16 49255748 to 49255778 30 - TSS region transcription start site region 141320
Tssr141321 16 49255779 to 49255786 7 - TSS region transcription start site region 141321
Tssr141322 16 49255788 to 49255795 7 - TSS region transcription start site region 141322
Gm5407 16 49296651 to 49297898 1247 - pseudogene predicted gene 5407
D16Mit85 16 49344643 to 49344768 125 DNA segment DNA segment, Chr 16, Massachusetts Institute of Technology 85
D16Ium61 16 49362747 to 49362937 190 DNA segment DNA segment, Chr 16, Indiana University Medical 61
Gm18694 16 49369052 to 49370277 1225 + pseudogene predicted gene, 18694
D16Mit91 16 49398727 to 49398872 145 DNA segment DNA segment, Chr 16, Massachusetts Institute of Technology 91
Gm4802 16 49412261 to 49412630 369 - protein coding gene predicted gene 4802
Gm6931 16 49424806 to 49425814 1008 + pseudogene predicted gene 6931
D16Mit15 16 49492432 to 49492570 138 DNA segment DNA segment, Chr 16, Massachusetts Institute of Technology 15
Cypr1 16 49492432 to 49492570 138 QTL cytokine production 1
Gm35938 16 49562934 to 49568000 5066 - protein coding gene predicted gene, 35938
Gm31494 16 49572319 to 49644652 72333 - lncRNA gene predicted gene, 31494