Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 16:48808886-49348894

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60 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Retnlb 16 48816856 to 48818892 2036 + protein coding gene resistin like beta
Tssr138678 16 48816961 to 48816976 15 + TSS region transcription start site region 138678
Tssr4890 16 48818659 to 48818666 7 - TSS region transcription start site region 4890
Tssr141313 16 48818718 to 48818733 15 - TSS region transcription start site region 141313
Tssr138679 16 48818875 to 48818898 23 + TSS region transcription start site region 138679
Tssr138680 16 48842477 to 48842487 10 + TSS region transcription start site region 138680
Tssr138681 16 48842531 to 48842580 49 + TSS region transcription start site region 138681
Retnla 16 48842552 to 48844461 1909 + protein coding gene resistin like alpha
Tssr138682 16 48842608 to 48842631 23 + TSS region transcription start site region 138682
Tssr138683 16 48842654 to 48842661 7 + TSS region transcription start site region 138683
Tssr138684 16 48842671 to 48842695 24 + TSS region transcription start site region 138684
Tssr138685 16 48842719 to 48842736 17 + TSS region transcription start site region 138685
Tssr138686 16 48842843 to 48842855 12 + TSS region transcription start site region 138686
Tssr138687 16 48842884 to 48842897 13 + TSS region transcription start site region 138687
Tssr138688 16 48843543 to 48843595 52 + TSS region transcription start site region 138688
Tssr138689 16 48844171 to 48844183 12 + TSS region transcription start site region 138689
Tssr138690 16 48844229 to 48844240 11 + TSS region transcription start site region 138690
Tssr138691 16 48844266 to 48844293 27 + TSS region transcription start site region 138691
Tssr138692 16 48870941 to 48870949 8 + TSS region transcription start site region 138692
Tssr138693 16 48870969 to 48870979 10 + TSS region transcription start site region 138693
Tssr141314 16 48871898 to 48871909 11 - TSS region transcription start site region 141314
Tssr138694 16 48871994 to 48872009 15 + TSS region transcription start site region 138694
Tssr138695 16 48872024 to 48872049 25 + TSS region transcription start site region 138695
Tssr138696 16 48872050 to 48872070 20 + TSS region transcription start site region 138696
Tssr4891 16 48872431 to 48872448 17 - TSS region transcription start site region 4891
Tssr141315 16 48872466 to 48872491 25 - TSS region transcription start site region 141315
Tssr138697 16 48872613 to 48872626 13 + TSS region transcription start site region 138697
Retnlg 16 48872621 to 48874496 1875 + protein coding gene resistin like gamma
Tssr138698 16 48872637 to 48872650 13 + TSS region transcription start site region 138698
Tssr138699 16 48872678 to 48872688 10 + TSS region transcription start site region 138699
Tssr138700 16 48872697 to 48872800 103 + TSS region transcription start site region 138700
Tssr138701 16 48872818 to 48872825 7 + TSS region transcription start site region 138701
Tssr138702 16 48872839 to 48872846 7 + TSS region transcription start site region 138702
Tssr138703 16 48872855 to 48872865 10 + TSS region transcription start site region 138703
Tssr138704 16 48872950 to 48872961 11 + TSS region transcription start site region 138704
Tssr141316 16 48872968 to 48872996 28 - TSS region transcription start site region 141316
Tssr4892 16 48873089 to 48873103 14 + TSS region transcription start site region 4892
Tssr138705 16 48873309 to 48873343 34 + TSS region transcription start site region 138705
Tssr138706 16 48873623 to 48873638 15 + TSS region transcription start site region 138706
Tssr4893 16 48874071 to 48874078 7 + TSS region transcription start site region 4893
Tssr4894 16 48874320 to 48874327 7 + TSS region transcription start site region 4894
Tssr4895 16 48874353 to 48874376 23 - TSS region transcription start site region 4895
Tssr4896 16 48874378 to 48874411 33 - TSS region transcription start site region 4896
Tssr141317 16 48874490 to 48874496 6 - TSS region transcription start site region 141317
Dzip3 16 48924228 to 48994153 69925 - protein coding gene DAZ interacting protein 3, zinc finger
Gm22576 16 48942999 to 48943102 103 - snRNA gene predicted gene, 22576
Cpgi8305 16 48993495 to 48994569 1074 CpG island CpG island 8305
Tssr141318 16 48993931 to 48993949 18 - TSS region transcription start site region 141318
Tssr141319 16 48994081 to 48994123 42 - TSS region transcription start site region 141319
Cip2a 16 48994188 to 49019705 25517 + protein coding gene cell proliferation regulating inhibitor of protein phosphatase 2A
Tssr138707 16 48994197 to 48994239 42 + TSS region transcription start site region 138707
Tssr138708 16 49057399 to 49057413 14 + TSS region transcription start site region 138708
Myh15 16 49057486 to 49199104 141618 + protein coding gene myosin, heavy chain 15
Tssr138709 16 49078886 to 49078894 8 + TSS region transcription start site region 138709
1700026J12Rik 16 49210641 to 49255772 45131 - lincRNA gene RIKEN cDNA 1700026J12 gene
Tssr141320 16 49255748 to 49255778 30 - TSS region transcription start site region 141320
Tssr141321 16 49255779 to 49255786 7 - TSS region transcription start site region 141321
Tssr141322 16 49255788 to 49255795 7 - TSS region transcription start site region 141322
Gm5407 16 49296651 to 49297898 1247 - pseudogene predicted gene 5407
D16Mit85 16 49344643 to 49344768 125 DNA segment DNA segment, Chr 16, Massachusetts Institute of Technology 85