Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 16:48699378-49049411

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68 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Trat1 16 48730774 to 48772021 41247 - protein coding gene T cell receptor associated transmembrane adaptor 1
Gm8670 16 48749400 to 48750448 1048 - pseudogene predicted gene 8670
Cpgi8304 16 48750186 to 48750506 320 CpG island CpG island 8304
Tssr4889 16 48771967 to 48771976 9 - TSS region transcription start site region 4889
Tssr141307 16 48772009 to 48772030 21 - TSS region transcription start site region 141307
Tssr141308 16 48772036 to 48772051 15 - TSS region transcription start site region 141308
Tssr141309 16 48772052 to 48772069 17 - TSS region transcription start site region 141309
Tssr141310 16 48772102 to 48772143 41 - TSS region transcription start site region 141310
Tssr141311 16 48772145 to 48772157 12 - TSS region transcription start site region 141311
Tssr141312 16 48786405 to 48786414 9 - TSS region transcription start site region 141312
Tssr138671 16 48786559 to 48786577 18 + TSS region transcription start site region 138671
Tssr138672 16 48786602 to 48786613 11 + TSS region transcription start site region 138672
Tssr138673 16 48786649 to 48786678 29 + TSS region transcription start site region 138673
Tssr138674 16 48790203 to 48790212 9 + TSS region transcription start site region 138674
Tssr138675 16 48790238 to 48790255 17 + TSS region transcription start site region 138675
Tssr138676 16 48790269 to 48790281 12 + TSS region transcription start site region 138676
Tssr138677 16 48790301 to 48790307 6 + TSS region transcription start site region 138677
Retnlb 16 48816856 to 48818892 2036 + protein coding gene resistin like beta
Tssr138678 16 48816961 to 48816976 15 + TSS region transcription start site region 138678
Tssr4890 16 48818659 to 48818666 7 - TSS region transcription start site region 4890
Tssr141313 16 48818718 to 48818733 15 - TSS region transcription start site region 141313
Tssr138679 16 48818875 to 48818898 23 + TSS region transcription start site region 138679
Tssr138680 16 48842477 to 48842487 10 + TSS region transcription start site region 138680
Tssr138681 16 48842531 to 48842580 49 + TSS region transcription start site region 138681
Retnla 16 48842552 to 48844461 1909 + protein coding gene resistin like alpha
Tssr138682 16 48842608 to 48842631 23 + TSS region transcription start site region 138682
Tssr138683 16 48842654 to 48842661 7 + TSS region transcription start site region 138683
Tssr138684 16 48842671 to 48842695 24 + TSS region transcription start site region 138684
Tssr138685 16 48842719 to 48842736 17 + TSS region transcription start site region 138685
Tssr138686 16 48842843 to 48842855 12 + TSS region transcription start site region 138686
Tssr138687 16 48842884 to 48842897 13 + TSS region transcription start site region 138687
Tssr138688 16 48843543 to 48843595 52 + TSS region transcription start site region 138688
Tssr138689 16 48844171 to 48844183 12 + TSS region transcription start site region 138689
Tssr138690 16 48844229 to 48844240 11 + TSS region transcription start site region 138690
Tssr138691 16 48844266 to 48844293 27 + TSS region transcription start site region 138691
Tssr138692 16 48870941 to 48870949 8 + TSS region transcription start site region 138692
Tssr138693 16 48870969 to 48870979 10 + TSS region transcription start site region 138693
Tssr141314 16 48871898 to 48871909 11 - TSS region transcription start site region 141314
Tssr138694 16 48871994 to 48872009 15 + TSS region transcription start site region 138694
Tssr138695 16 48872024 to 48872049 25 + TSS region transcription start site region 138695
Tssr138696 16 48872050 to 48872070 20 + TSS region transcription start site region 138696
Tssr4891 16 48872431 to 48872448 17 - TSS region transcription start site region 4891
Tssr141315 16 48872466 to 48872491 25 - TSS region transcription start site region 141315
Tssr138697 16 48872613 to 48872626 13 + TSS region transcription start site region 138697
Retnlg 16 48872621 to 48874496 1875 + protein coding gene resistin like gamma
Tssr138698 16 48872637 to 48872650 13 + TSS region transcription start site region 138698
Tssr138699 16 48872678 to 48872688 10 + TSS region transcription start site region 138699
Tssr138700 16 48872697 to 48872800 103 + TSS region transcription start site region 138700
Tssr138701 16 48872818 to 48872825 7 + TSS region transcription start site region 138701
Tssr138702 16 48872839 to 48872846 7 + TSS region transcription start site region 138702
Tssr138703 16 48872855 to 48872865 10 + TSS region transcription start site region 138703
Tssr138704 16 48872950 to 48872961 11 + TSS region transcription start site region 138704
Tssr141316 16 48872968 to 48872996 28 - TSS region transcription start site region 141316
Tssr4892 16 48873089 to 48873103 14 + TSS region transcription start site region 4892
Tssr138705 16 48873309 to 48873343 34 + TSS region transcription start site region 138705
Tssr138706 16 48873623 to 48873638 15 + TSS region transcription start site region 138706
Tssr4893 16 48874071 to 48874078 7 + TSS region transcription start site region 4893
Tssr4894 16 48874320 to 48874327 7 + TSS region transcription start site region 4894
Tssr4895 16 48874353 to 48874376 23 - TSS region transcription start site region 4895
Tssr4896 16 48874378 to 48874411 33 - TSS region transcription start site region 4896
Tssr141317 16 48874490 to 48874496 6 - TSS region transcription start site region 141317
Dzip3 16 48924228 to 48994153 69925 - protein coding gene DAZ interacting protein 3, zinc finger
Gm22576 16 48942999 to 48943102 103 - snRNA gene predicted gene, 22576
Cpgi8305 16 48993495 to 48994569 1074 CpG island CpG island 8305
Tssr141318 16 48993931 to 48993949 18 - TSS region transcription start site region 141318
Tssr141319 16 48994081 to 48994123 42 - TSS region transcription start site region 141319
Cip2a 16 48994188 to 49019705 25517 + protein coding gene cell proliferation regulating inhibitor of protein phosphatase 2A
Tssr138707 16 48994197 to 48994239 42 + TSS region transcription start site region 138707