Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 16:48629400-48870448

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41 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Morc1 16 48431237 to 48630900 199663 + protein coding gene microrchidia 1
Tssr138668 16 48629918 to 48629922 4 + TSS region transcription start site region 138668
Tssr138669 16 48629988 to 48630011 23 + TSS region transcription start site region 138669
Tssr138670 16 48630154 to 48630166 12 + TSS region transcription start site region 138670
D16Mit62 16 48684711 to 48684860 149 DNA segment DNA segment, Chr 16, Massachusetts Institute of Technology 62
D16Mit170 16 48684719 to 48684843 124 DNA segment DNA segment, Chr 16, Massachusetts Institute of Technology 170
Trat1 16 48730774 to 48772021 41247 - protein coding gene T cell receptor associated transmembrane adaptor 1
Gm8670 16 48749400 to 48750448 1048 - pseudogene predicted gene 8670
Cpgi8304 16 48750186 to 48750506 320 CpG island CpG island 8304
Tssr4889 16 48771967 to 48771976 9 - TSS region transcription start site region 4889
Tssr141307 16 48772009 to 48772030 21 - TSS region transcription start site region 141307
Tssr141308 16 48772036 to 48772051 15 - TSS region transcription start site region 141308
Tssr141309 16 48772052 to 48772069 17 - TSS region transcription start site region 141309
Tssr141310 16 48772102 to 48772143 41 - TSS region transcription start site region 141310
Tssr141311 16 48772145 to 48772157 12 - TSS region transcription start site region 141311
Tssr141312 16 48786405 to 48786414 9 - TSS region transcription start site region 141312
Tssr138671 16 48786559 to 48786577 18 + TSS region transcription start site region 138671
Tssr138672 16 48786602 to 48786613 11 + TSS region transcription start site region 138672
Tssr138673 16 48786649 to 48786678 29 + TSS region transcription start site region 138673
Tssr138674 16 48790203 to 48790212 9 + TSS region transcription start site region 138674
Tssr138675 16 48790238 to 48790255 17 + TSS region transcription start site region 138675
Tssr138676 16 48790269 to 48790281 12 + TSS region transcription start site region 138676
Tssr138677 16 48790301 to 48790307 6 + TSS region transcription start site region 138677
Retnlb 16 48816856 to 48818892 2036 + protein coding gene resistin like beta
Tssr138678 16 48816961 to 48816976 15 + TSS region transcription start site region 138678
Tssr4890 16 48818659 to 48818666 7 - TSS region transcription start site region 4890
Tssr141313 16 48818718 to 48818733 15 - TSS region transcription start site region 141313
Tssr138679 16 48818875 to 48818898 23 + TSS region transcription start site region 138679
Tssr138680 16 48842477 to 48842487 10 + TSS region transcription start site region 138680
Tssr138681 16 48842531 to 48842580 49 + TSS region transcription start site region 138681
Retnla 16 48842552 to 48844461 1909 + protein coding gene resistin like alpha
Tssr138682 16 48842608 to 48842631 23 + TSS region transcription start site region 138682
Tssr138683 16 48842654 to 48842661 7 + TSS region transcription start site region 138683
Tssr138684 16 48842671 to 48842695 24 + TSS region transcription start site region 138684
Tssr138685 16 48842719 to 48842736 17 + TSS region transcription start site region 138685
Tssr138686 16 48842843 to 48842855 12 + TSS region transcription start site region 138686
Tssr138687 16 48842884 to 48842897 13 + TSS region transcription start site region 138687
Tssr138688 16 48843543 to 48843595 52 + TSS region transcription start site region 138688
Tssr138689 16 48844171 to 48844183 12 + TSS region transcription start site region 138689
Tssr138690 16 48844229 to 48844240 11 + TSS region transcription start site region 138690
Tssr138691 16 48844266 to 48844293 27 + TSS region transcription start site region 138691